RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CRABP2P29373 138 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 POLD2P49005 469 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 COPAP53621 1224 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 LIMK2P53671 638 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SESN2P58004 480 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 IRX1P78414 480 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 MXRA7P84157 204 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 BTKQ06187 659 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZBTB17Q13105 803 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 POLD3Q15054 466 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RIPOR1Q6ZS17 1223 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PID1Q7Z2X4 250 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RASSF3Q86WH2 238 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF354CQ86Y25 554 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 USP33Q8TEY7 942 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PANX3Q96QZ0 392 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CASS4Q9NQ75 786 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TDP1Q9NUW8 608 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SYBUQ9NX95 663 aa15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 KLHL8Q9P2G9 620 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 IPO11Q9UI26 975 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-236ENST00000584991 A0A1B0GVM2 712 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TCAF2A6NFQ2 919 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TBL1XO60907 577 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SIN3BO75182 1162 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SNUPNO95149 360 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PRAMEF12O95522 483 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 JCHAINP01591 159 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PSMB4P28070 264 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ADSLP30566 484 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 NUMBP49757 651 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SESN3P58005 492 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RPL26P61254 145 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RCN2Q14257 317 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 C1orf146Q5VVC0 180 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ARMC3Q5W041 872 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PGM2L1Q6PCE3 622 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 LRRC49Q8IUZ0 686 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 FAM217AQ8IXS0 508 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RIN3Q8TB24 985 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZSCAN18Q8TBC5 510 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ACTRT2Q8TDY3 377 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TMA16Q96EY4 203 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF778Q96MU6 729 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 AGAP3Q96P47 875 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SORT1Q99523 831 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 EBF4Q9BQW3 602 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 RETREG1Q9H6L5 497 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF395Q9H8N7 513 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SPATS2LQ9NUQ6 558 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 NDE1Q9NXR1 346 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 MARCOQ9UEW3 520 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ANKRD6Q9Y2G4 727 aa15.09■□□□□ 0.01
CDK5RAP3-236ENST00000584991 A0A088AWK7 358 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 GFRA2O00451 464 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF195O14628 629 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 MATN3O15232 486 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZBTB24O43167 697 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 NEBLO76041 1014 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ACVRL1P37023 503 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 IDH3AP50213 366 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 YBEYP58557 167 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZNF177Q13360 481 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PARP15Q460N3 678 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 KCTD11Q693B1 232 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TIGD7Q6NT04 549 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 ZCCHC23Q6ZST2 131 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CHST9Q7L1S5 443 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 CLEC14AQ86T13 490 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 C10orf107Q8IVU9 208 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 HJURPQ8NCD3 748 aaPredicted RBP15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 OR52K2Q8NGK3 314 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 GATA6Q92908 595 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TRIM56Q9BRZ2 755 aaKnown RBP15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 IL22Q9GZX6 179 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 SNX15Q9NRS6 342 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 TMEM216Q9P0N5 145 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 PDP2Q9P2J9 529 aa15.08■□□□□ 0.01
CDK5RAP3-236ENST00000584991 A0A0D9SEW6 157 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 E2F8A0AVK6 867 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 DPPA5A6NC42 116 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 J3KR12 359 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 ITM2AO43736 263 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 PRKCGP05129 697 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 RHOCP08134 193 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 LINGO3P0C6S8 592 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 KCNA4P22459 653 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 CPA2P48052 419 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 RGS19P49795 217 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 GNA12Q03113 381 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 SERINC3Q13530 473 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 TMEM154Q6P9G4 183 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 TMEM184AQ6ZMB5 413 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 LINC00523Q86TU6 105 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 KLHDC8BQ8IXV7 354 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 CPXM2Q8N436 756 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 EFHBQ8N7U6 833 aa15.08■□□□□ 0
CDK5RAP3-236ENST00000584991 TDRD5Q8NAT2 981 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms