RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 CBARPQ8N350 705 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-222ENST00000584908 TP53I13Q8NBR0 393 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-222ENST00000584908 OR13H1Q8NG92 308 aa16.34■□□□□ 0.21
ERBB2-222ENST00000584908 PIH1D2Q8WWB5 315 aa16.34■□□□□ 0.21
ERBB2-222ENST00000584908 P3H4Q92791 437 aa16.34■□□□□ 0.21
ERBB2-222ENST00000584908 IFT43Q96FT9 208 aa16.34■□□□□ 0.21
ERBB2-222ENST00000584908 SCRN2Q96FV2 425 aa16.34■□□□□ 0.21
ERBB2-222ENST00000584908 MYOCQ99972 504 aa16.34■□□□□ 0.21
ERBB2-222ENST00000584908 WRAP53Q9BUR4 548 aaKnown RBP16.34■□□□□ 0.21
ERBB2-222ENST00000584908 C1QTNF7Q9BXJ2 289 aa16.34■□□□□ 0.21
ERBB2-222ENST00000584908 SLC32A1Q9H598 525 aa16.34■□□□□ 0.21
ERBB2-222ENST00000584908 SAE1Q9UBE0 346 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-222ENST00000584908 PCDHB9Q9Y5E1 797 aa16.34■□□□□ 0.21
ERBB2-222ENST00000584908 RAI2Q9Y5P3 530 aa16.34■□□□□ 0.21
ERBB2-222ENST00000584908 CAPN6Q9Y6Q1 641 aa16.34■□□□□ 0.21
ERBB2-222ENST00000584908 KCNK3O14649 394 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 MMP2P08253 660 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 NFKBIAP25963 317 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 RABIFP47224 123 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 ARRB1P49407 418 aaPredicted RBP16.33■□□□□ 0.2
ERBB2-222ENST00000584908 NOVA1P51513 510 aaKnown RBP16.33■□□□□ 0.2
ERBB2-222ENST00000584908 RPL26P61254 145 aaKnown RBP16.33■□□□□ 0.2
ERBB2-222ENST00000584908 FAM193AP78312 1265 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 ITKQ08881 620 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 XRCC4Q13426 336 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 SUZ12Q15022 739 aaKnown RBP16.33■□□□□ 0.2
ERBB2-222ENST00000584908 SLC14A2Q15849 920 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 TEX44Q53QW1 395 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 ARMC12Q5T9G4 340 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 Q6ZSR6 202 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 NAXDQ8IW45 347 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 BAHD1Q8TBE0 780 aaPredicted RBP16.33■□□□□ 0.2
ERBB2-222ENST00000584908 SAP25Q8TEE9 199 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 TFB1MQ8WVM0 346 aaKnown RBP16.33■□□□□ 0.2
ERBB2-222ENST00000584908 TADA1Q96BN2 335 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 HES6Q96HZ4 224 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 HERPUD2Q9BSE4 406 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 TDRD1Q9BXT4 1180 aaKnown RBP16.33■□□□□ 0.2
ERBB2-222ENST00000584908 OSBPL8Q9BZF1 889 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 B4GALT6Q9UBX8 382 aa16.33■□□□□ 0.2
ERBB2-222ENST00000584908 RPL26L1Q9UNX3 145 aaKnown RBP16.33■□□□□ 0.2
ERBB2-222ENST00000584908 TDRD6O60522 2096 aaKnown RBP16.33■□□□□ 0.2
ERBB2-222ENST00000584908 SPTY2D1-AS1A0A0U1RR47 76 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 HACD1B0YJ81 288 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 DDX3YO15523 660 aaKnown RBP16.32■□□□□ 0.2
ERBB2-222ENST00000584908 MTSS1O43312 755 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 SH3BP5O60239 455 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 NEBLO76041 1014 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 PRLP01236 227 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 PRKCGP05129 697 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 PDHA1P08559 390 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 PYGMP11217 842 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 GM2AP17900 193 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 EPHA8P29322 1005 aaPredicted RBP16.32■□□□□ 0.2
ERBB2-222ENST00000584908 IGFALSP35858 605 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 YPEL5P62699 121 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 NOMO1Q15155 1222 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 LLGL1Q15334 1064 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 PSAPL1Q6NUJ1 521 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 KANSL1Q7Z3B3 1105 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 UBL4BQ8N7F7 174 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 DEFB124Q8NES8 71 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 PDCD6IPQ8WUM4 868 aaKnown RBP16.32■□□□□ 0.2
ERBB2-222ENST00000584908 QKIQ96PU8 341 aaKnown RBP eCLIP16.32■□□□□ 0.2
ERBB2-222ENST00000584908 HEMGNQ9BXL5 484 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 PCOLCE2Q9UKZ9 415 aa16.32■□□□□ 0.2
ERBB2-222ENST00000584908 GIPC1O14908 333 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 HEXIM1O94992 359 aaKnown RBP16.31■□□□□ 0.2
ERBB2-222ENST00000584908 FTCDO95954 541 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 CCDC175P0C221 793 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 ELFN1P0C7U0 828 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 CYP2A6P11509 494 aaPredicted RBP16.31■□□□□ 0.2
ERBB2-222ENST00000584908 CA4P22748 312 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 PTPN3P26045 913 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 VIPR1P32241 457 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 CETN2P41208 172 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 SKOR1P84550 965 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 WASHC5Q12768 1159 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 LRRC14Q15048 493 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 WSCD2Q2TBF2 565 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 PRAMEF14Q5SWL7 426 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 PTAR1Q7Z6K3 402 aaPredicted RBP16.31■□□□□ 0.2
ERBB2-222ENST00000584908 GLRX5Q86SX6 157 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 IMP4Q96G21 291 aaKnown RBP16.31■□□□□ 0.2
ERBB2-222ENST00000584908 TEKT5Q96M29 485 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 COQ10AQ96MF6 247 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 VAT1Q99536 393 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 SLC25A51Q9H1U9 297 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 MBNL1Q9NR56 388 aaKnown RBP16.31■□□□□ 0.2
ERBB2-222ENST00000584908 KCTD5Q9NXV2 234 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 GUCA1BQ9UMX6 200 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 COQ6Q9Y2Z9 468 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 TTLL3Q9Y4R7 772 aa16.31■□□□□ 0.2
ERBB2-222ENST00000584908 LRP4O75096 1905 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 A0A0J9YYE9 177 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 NPIPB15A6NHN6 443 aaPredicted RBP16.3■□□□□ 0.2
ERBB2-222ENST00000584908 PSMD11O00231 422 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 NRDCO43847 1150 aa16.3■□□□□ 0.2
ERBB2-222ENST00000584908 RECQL5O94762 991 aaPredicted RBP16.3■□□□□ 0.2
ERBB2-222ENST00000584908 TRBC1P01850 177 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms