RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 FOXR1Q6PIV2 292 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 CYP4V2Q6ZWL3 525 aaPredicted RBP15.81■□□□□ 0.12
SKA2-209ENST00000583976 ZNF354CQ86Y25 554 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 TP53I13Q8NBR0 393 aaPredicted RBP15.81■□□□□ 0.12
SKA2-209ENST00000583976 HSPH1Q92598 858 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 RAB7BQ96AH8 199 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 CENPTQ96BT3 561 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 PRR11Q96HE9 360 aaPredicted RBP15.81■□□□□ 0.12
SKA2-209ENST00000583976 EPAS1Q99814 870 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 NCAPGQ9BPX3 1015 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 BOCQ9BWV1 1114 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 LACRTQ9GZZ8 138 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 CLPBQ9H078 707 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 COQ6Q9Y2Z9 468 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 CSNK1G3Q9Y6M4 447 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 DUSP10Q9Y6W6 482 aa15.81■□□□□ 0.12
SKA2-209ENST00000583976 EME2A4GXA9 379 aaPredicted RBP15.8■□□□□ 0.12
SKA2-209ENST00000583976 ARHGAP6O43182 974 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 MTA2O94776 668 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 ETFBP38117 255 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 THOP1P52888 689 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 AIF1P55008 147 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 NAP1L1P55209 391 aaKnown RBP15.8■□□□□ 0.12
SKA2-209ENST00000583976 SNRPD1P62314 119 aaKnown RBP15.8■□□□□ 0.12
SKA2-209ENST00000583976 CCZ1BP86790 482 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 CCZ1P86791 482 aaPredicted RBP15.8■□□□□ 0.12
SKA2-209ENST00000583976 MYLK3Q32MK0 819 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 C6orf132Q5T0Z8 1188 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 KCTD16Q68DU8 428 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 GDPD4Q6W3E5 623 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 RBM44Q6ZP01 1051 aaKnown RBP15.8■□□□□ 0.12
SKA2-209ENST00000583976 KYQ8NBH2 561 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 HMCESQ96FZ2 354 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 GDAP1L1Q96MZ0 367 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 KCTD15Q96SI1 283 aaPredicted RBP15.8■□□□□ 0.12
SKA2-209ENST00000583976 IL12RB2Q99665 862 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 OSBPL1AQ9BXW6 950 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 MAGEH1Q9H213 219 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 THSD1Q9NS62 852 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 EVA1BQ9NVM1 165 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 SPASTQ9UBP0 616 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 SALL4Q9UJQ4 1053 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 HYOU1Q9Y4L1 999 aa15.8■□□□□ 0.12
SKA2-209ENST00000583976 NRDCO43847 1150 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 RARAP10276 462 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 KRT10P13645 584 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 TNNT1P13805 278 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 TSHRP16473 764 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 ARHGAP25P42331 645 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 GEMIN4P57678 1058 aaKnown RBP15.79■□□□□ 0.12
SKA2-209ENST00000583976 TAS2R40P59535 323 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 ERVPABLB-1P60509 514 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 SLC25A11Q02978 314 aaKnown RBP15.79■□□□□ 0.12
SKA2-209ENST00000583976 CFHR1Q03591 330 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 TCEAL1Q15170 157 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 HADHQ16836 314 aaKnown RBP15.79■□□□□ 0.12
SKA2-209ENST00000583976 ATP13A4Q4VNC1 1196 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 TAF1BQ53T94 588 aaPredicted RBP15.79■□□□□ 0.12
SKA2-209ENST00000583976 PPP6R3Q5H9R7 873 aaPredicted RBP15.79■□□□□ 0.12
SKA2-209ENST00000583976 MACC1Q6ZN28 852 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 B3GNT8Q7Z7M8 397 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 ZSCAN30Q86W11 494 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 PLPP6Q8IY26 295 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 RTL3Q8N8U3 475 aaKnown RBP15.79■□□□□ 0.12
SKA2-209ENST00000583976 PCDH19Q8TAB3 1148 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 CXorf40AQ8TE69 158 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 ASB12Q8WXK4 309 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 ZNF830Q96NB3 372 aaPredicted RBP15.79■□□□□ 0.12
SKA2-209ENST00000583976 GOLPH3Q9H4A6 298 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 SIRPGQ9P1W8 387 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 LHX3Q9UBR4 397 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 TRIM10Q9UDY6 481 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 LCMT1Q9UIC8 334 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 RABGEF1Q9UJ41 708 aa15.79■□□□□ 0.12
SKA2-209ENST00000583976 COL6A6A6NMZ7 2263 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 BOD1L1Q8NFC6 3051 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 A0A0A6YYK5 440 aaPredicted RBP15.78■□□□□ 0.12
SKA2-209ENST00000583976 LMO7DNF2Z398 122 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 PYCARD-AS1I3L0S3 204 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 ERVH48-1M5A8F1 160 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 TPP1O14773 563 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 KDELR3O43731 214 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 BUB1BO60566 1050 aaPredicted RBP15.78■□□□□ 0.12
SKA2-209ENST00000583976 TM7SF2O76062 418 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 IGSF6O95976 241 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 PRKCGP05129 697 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 EPHB2P29323 1055 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 MAN1A1P33908 653 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 RHOAP61586 193 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 SKOR1P84550 965 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 KIF5AQ12840 1032 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 ALG11Q2TAA5 492 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 BOLA3Q53S33 107 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 ZFYVE27Q5T4F4 411 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 BROXQ5VW32 411 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 TTC7BQ86TV6 843 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 LSMEM2Q8N112 164 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 PDLIM2Q96JY6 352 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 CCDC3Q9BQI4 270 aa15.78■□□□□ 0.12
SKA2-209ENST00000583976 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms