RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 FBXL12Q9NXK8 326 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 KCTD5Q9NXV2 234 aa10.46□□□□□ -0.73
CCDC47-203ENST00000580986 BCCIPQ9P287 314 aaKnown RBP eCLIP10.46□□□□□ -0.73
CCDC47-203ENST00000580986 ZNF318Q5VUA4 2279 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 TTC24A2A3L6 582 aaPredicted RBP10.45□□□□□ -0.74
CCDC47-203ENST00000580986 CAPN8A6NHC0 703 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 PSMD11O00231 422 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 AXIN1O15169 862 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 TSPAN6O43657 245 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 SLU7O95391 586 aaKnown RBP10.45□□□□□ -0.74
CCDC47-203ENST00000580986 PDHA1P08559 390 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 CYP2A6P11509 494 aaPredicted RBP10.45□□□□□ -0.74
CCDC47-203ENST00000580986 TIMP2P16035 220 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 NUDT1P36639 197 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 MMP12P39900 470 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 ADCY8P40145 1251 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 MAGEA3P43357 314 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 ADPRHP54922 357 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 CREB5Q02930 508 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 CNTN1Q12860 1018 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 CDH17Q12864 832 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 AGERQ15109 404 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 QPCTQ16769 361 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 MAP7D1Q3KQU3 841 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 USP39Q53GS9 565 aaKnown RBP10.45□□□□□ -0.74
CCDC47-203ENST00000580986 SIRPB2Q5JXA9 342 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 DENND5AQ6IQ26 1287 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 ERAP2Q6P179 960 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 FBXL19Q6PCT2 694 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 KIAA1324Q6UXG2 1013 aaKnown RBP10.45□□□□□ -0.74
CCDC47-203ENST00000580986 SLC36A4Q6YBV0 504 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 DPPA4Q7L190 304 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 TTC7BQ86TV6 843 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 ZSWIM9Q86XI8 627 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 HDDC3Q8N4P3 179 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 EIF1ADQ8N9N8 165 aaKnown RBP10.45□□□□□ -0.74
CCDC47-203ENST00000580986 IPMKQ8NFU5 416 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 ASB12Q8WXK4 309 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 PEX13Q92968 403 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 SPACA7Q96KW9 195 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 FOXP3Q9BZS1 431 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 BTBD1Q9H0C5 482 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 KCNH6Q9H252 994 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 XAB2Q9HCS7 855 aaKnown RBP10.45□□□□□ -0.74
CCDC47-203ENST00000580986 CASS4Q9NQ75 786 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 WSB2Q9NYS7 404 aaPredicted RBP10.45□□□□□ -0.74
CCDC47-203ENST00000580986 UBP1Q9NZI7 540 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 CHKBQ9Y259 395 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 FADS3Q9Y5Q0 445 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 EML5Q05BV3 1969 aa10.45□□□□□ -0.74
CCDC47-203ENST00000580986 CACNA1IQ9P0X4 2223 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 IGHV1OR15-9A0A0B4J2B8 117 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 A0A1W2PP55 124 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 TP73O15350 636 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 SPINT1O43278 529 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 PPFIA2O75334 1257 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 RNASEH2AO75792 299 aaKnown RBP10.44□□□□□ -0.74
CCDC47-203ENST00000580986 XPAP23025 273 aaPredicted RBP10.44□□□□□ -0.74
CCDC47-203ENST00000580986 CD6P30203 668 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 VIPR1P32241 457 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 ABL2P42684 1182 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 RPL21P46778 160 aaKnown RBP10.44□□□□□ -0.74
CCDC47-203ENST00000580986 LMAN1P49257 510 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 VPS41P49754 854 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 METAP1P53582 386 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 EPHB1P54762 984 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 TAS2R38P59533 333 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 PDE1BQ01064 536 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 CALCOCO2Q13137 446 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 MSLNQ13421 630 aaPredicted RBP10.44□□□□□ -0.74
CCDC47-203ENST00000580986 LAMB3Q13751 1172 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 TRIP13Q15645 432 aaPredicted RBP10.44□□□□□ -0.74
CCDC47-203ENST00000580986 PCSK7Q16549 785 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 TMEM52BQ4KMG9 183 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 FAXCQ5TGI0 409 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 IZUMO3Q5VZ72 239 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 KIAA1161Q6NSJ0 714 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 HIBCHQ6NVY1 386 aaPredicted RBP10.44□□□□□ -0.74
CCDC47-203ENST00000580986 LRRC8BQ6P9F7 803 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 PRUNE1Q86TP1 453 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 TRIM69Q86WT6 500 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 PGBD3Q8N328 593 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 CBARPQ8N350 705 aaPredicted RBP10.44□□□□□ -0.74
CCDC47-203ENST00000580986 ZBTB44Q8NCP5 570 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 LPCAT1Q8NF37 534 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 CADM4Q8NFZ8 388 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 OR2T34Q8NGX1 318 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 BRSK1Q8TDC3 778 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 PDCD6IPQ8WUM4 868 aaKnown RBP10.44□□□□□ -0.74
CCDC47-203ENST00000580986 RMDN1Q96DB5 314 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 RANBP9Q96S59 729 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 TRIM51Q9BSJ1 452 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 LRRC1Q9BTT6 524 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 FICDQ9BVA6 458 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 IL22Q9GZX6 179 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 CDH19Q9H159 772 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 SLC6A17Q9H1V8 727 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 NEUROG2Q9H2A3 272 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 PCDH12Q9NPG4 1184 aa10.44□□□□□ -0.74
CCDC47-203ENST00000580986 POLR3BQ9NW08 1133 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms