RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ANTXRLA6NF34 631 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 DCTN3O75935 186 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CYBBP04839 570 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SERPINB3P29508 390 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 CPA2P48052 419 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 SERPINB9P50453 376 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 C11orf91Q3C1V1 193 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ELMSAN1Q6PJG2 1045 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 KDELC1Q6UW63 502 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZCCHC23Q6ZST2 131 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 EFHBQ8N7U6 833 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 RPP25Q9BUL9 199 aaKnown RBP12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 TNKS2Q9H2K2 1166 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 LRRC40Q9H9A6 602 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 BFARQ9NZS9 450 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 HEY2Q9UBP5 337 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 ZFP69BQ9UJL9 534 aa12.77□□□□□ -0.36
CDK5RAP3-217ENST00000580287 BUD23O43709 281 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SH3BP5O60239 455 aa12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ADRA1AP35348 466 aa12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 GALNT3Q14435 633 aa12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CAPRIN2Q6IMN6 1127 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 RANBP10Q6VN20 620 aa12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 LONP2Q86WA8 852 aa12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 C12orf40Q86WS4 652 aa12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 FIBINQ8TAL6 211 aa12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ZNF483Q8TF39 744 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PPP2R3CQ969Q6 453 aa12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 MIPEPQ99797 713 aa12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 POLR1EQ9GZS1 481 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ARL8BQ9NVJ2 186 aa12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 DUS2Q9NX74 493 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-217ENST00000580287 HEPACAM2A8MVW5 462 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 INSIG1O15503 277 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ANXA9O76027 345 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PDHA1P08559 390 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 DHRS4L1P0CG22 281 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PFKLP17858 780 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ZBTB16Q05516 673 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 USP4Q13107 963 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ADAM15Q13444 863 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CHI3L2Q15782 390 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PLEKHG6Q3KR16 790 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 FUT11Q495W5 492 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 TMEM215Q68D42 235 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 C16orf46Q6P387 395 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PACS1Q6VY07 963 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 MAMSTRQ6ZN01 415 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CLNKQ7Z7G1 428 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 NUDCD3Q8IVD9 361 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CELF5Q8N6W0 485 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 FAM13CQ8NE31 585 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PPP1R14CQ8TAE6 165 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PDCD6IPQ8WUM4 868 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PSKH2Q96QS6 385 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 MYADMQ96S97 322 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CDCA3Q99618 268 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SPOCK3Q9BQ16 436 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PLA2G2FQ9BZM2 168 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SLCO3A1Q9UIG8 710 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 COLQQ9Y215 455 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 EME2A4GXA9 379 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CCL22O00626 93 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 TPP1O14773 563 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 NMBRP28336 390 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 LTBRP36941 435 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ABCG1P45844 678 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 GEMP55040 296 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CDH17Q12864 832 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CBLBQ13191 982 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 GRM2Q14416 872 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PTPRCAPQ14761 206 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 DHCR24Q15392 516 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 STEAP4Q687X5 459 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 NAPEPLDQ6IQ20 393 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ALYREFQ86V81 257 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CCNJLQ8IV13 435 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SFTPA1Q8IWL2 248 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SMARCD2Q92925 531 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ERLEC1Q96DZ1 483 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CERS2Q96G23 380 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 NAT9Q9BTE0 207 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 C20orf27Q9GZN8 174 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 KCNK13Q9HB14 408 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SLC2A6Q9UGQ3 507 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 SEPT3Q9UH03 358 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 C2orf16Q68DN1 1984 aa12.76□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PENKP01210 267 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PEX19P40855 299 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 ABL2P42684 1182 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CTC1Q2NKJ3 1217 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 PITRM1Q5JRX3 1037 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 MPP7Q5T2T1 576 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 MARK2Q7KZI7 788 aaKnown RBP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 E2F7Q96AV8 911 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 LMLNQ96KR4 655 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 MGME1Q9BQP7 344 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 TMEM120AQ9BXJ8 343 aa12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 CORO1CQ9ULV4 474 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-217ENST00000580287 MTCH2Q9Y6C9 303 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms