RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PCDHGA7Q9Y5G6 932 aa13.49□□□□□ -0.25
TRAF4-214ENST00000580073 KALRNO60229 2985 aa13.49□□□□□ -0.25
TRAF4-214ENST00000580073 ARHGEF17Q96PE2 2063 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-214ENST00000580073 SSU72P8A0A1W2PR75 194 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 SIGLEC16A6NMB1 481 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 EIF3CLB5ME19 914 aaKnown RBP13.48□□□□□ -0.25
TRAF4-214ENST00000580073 D6RAR5 112 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 PLD2O14939 933 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 ZW10O43264 779 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 MMP20O60882 483 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 GCATO75600 419 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 NFKBIAP25963 317 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 GKP32189 559 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 HDAC4P56524 1084 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 MAMLD1Q13495 774 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 MTM1Q13496 603 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 C1orf61Q13536 156 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 CCDC122Q5T0U0 273 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 ARTNQ5T4W7 220 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 PLEKHA7Q6IQ23 1121 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 ALKBH5Q6P6C2 394 aaKnown RBP13.48□□□□□ -0.25
TRAF4-214ENST00000580073 XKR5Q6UX68 686 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 HID1Q8IV36 788 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 CCDC185Q8N715 623 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 PAF1Q8N7H5 531 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 TTC9Q92623 222 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 MED8Q96G25 268 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 WDR92Q96MX6 357 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 ZNF641Q96N77 438 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-214ENST00000580073 TUBGCP5Q96RT8 1024 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 CCNL2Q96S94 520 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-214ENST00000580073 EIF3CQ99613 913 aaKnown RBP13.48□□□□□ -0.25
TRAF4-214ENST00000580073 WRAP53Q9BUR4 548 aaKnown RBP13.48□□□□□ -0.25
TRAF4-214ENST00000580073 THAP2Q9H0W7 228 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 EPB41L5Q9HCM4 733 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 ATXN7L1Q9ULK2 861 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-214ENST00000580073 SSUH2Q9Y2M2 353 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 ACTL7AQ9Y615 435 aa13.48□□□□□ -0.25
TRAF4-214ENST00000580073 ATMQ13315 3056 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 TSPAN11A1L157 253 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 CFAP69A5D8W1 941 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 GOLGA6L3A6NEY3 463 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 WASH4PA8MWX3 477 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 B8ZZF3 427 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 CACNB4O00305 520 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-214ENST00000580073 NTN3O00634 580 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-214ENST00000580073 YY2O15391 372 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 TPM1P09493 284 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 JMJD7P0C870 316 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 SERPINA4P29622 427 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 CCKBRP32239 447 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 INHBCP55103 352 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 AGERQ15109 404 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 SLC18A3Q16572 532 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 TSR1Q2NL82 804 aaKnown RBP13.47□□□□□ -0.25
TRAF4-214ENST00000580073 TPRG1LQ5T0D9 272 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 DNAJC24Q6P3W2 148 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 PCSK4Q6UW60 755 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 ENPP7Q6UWV6 458 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 JAMLQ86YT9 394 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 FBXO39Q8N4B4 442 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 KYQ8NBH2 561 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 CCDC74AQ96AQ1 378 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 HMCESQ96FZ2 354 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 PANX2Q96RD6 677 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 MAGEB5Q9BZ81 275 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 TCEAL2Q9H3H9 227 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-214ENST00000580073 ATP13A3Q9H7F0 1226 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 AKAP7Q9P0M2 348 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-214ENST00000580073 SIRPGQ9P1W8 387 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 GULP1Q9UBP9 304 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 CNOT8Q9UFF9 292 aaKnown RBP13.47□□□□□ -0.25
TRAF4-214ENST00000580073 ACSL6Q9UKU0 697 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 GPR34Q9UPC5 381 aa13.47□□□□□ -0.25
TRAF4-214ENST00000580073 MGAQ8IWI9 3026 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 SOWAHDA6NJG2 315 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 RASA4BC9J798 803 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 FAM72CH0Y354 149 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 RASA4O43374 803 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 CREB3O43889 395 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 TNFP01375 233 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 RPLP0P05388 317 aaKnown RBP13.46□□□□□ -0.25
TRAF4-214ENST00000580073 LIPCP11150 499 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 PNLIPP16233 465 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 MMP12P39900 470 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 ZNF143P52747 638 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-214ENST00000580073 PDX1P52945 283 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 KIAA1024LP59773 190 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 TPI1P60174 286 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 SRP54P61011 504 aaKnown RBP13.46□□□□□ -0.25
TRAF4-214ENST00000580073 CLN3Q13286 438 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 SERINC3Q13530 473 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 PEX6Q13608 980 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 UGP2Q16851 508 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 ALG11Q2TAA5 492 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 LRRC73Q5JTD7 316 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 FAM72AQ5TYM5 149 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 FAM72DQ6L9T8 149 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 SCYL2Q6P3W7 929 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 RAD9BQ6WBX8 426 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms