RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ADAM18Q9Y3Q7 739 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 SNX14Q9Y5W7 946 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 AP1M2Q9Y6Q5 423 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 CDK13Q14004 1512 aaKnown RBP3.23□□□□□ -1.89
KPNB1-208ENST00000580019 UGGT2Q9NYU1 1516 aa3.23□□□□□ -1.89
KPNB1-208ENST00000580019 NHSL1Q5SYE7 1610 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ATP10BO94823 1461 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 AFF2P51816 1311 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ADGRF5Q8IZF2 1346 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 SCAPERQ9BY12 1400 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 RNF103-CHMP3A0A140T963 221 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 A0A1W2PRG0 241 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 GXYLT2A0PJZ3 443 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CDHR4A6H8M9 788 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 LRRC53A6NM62 1247 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 MARCH11A6NNE9 402 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 B5MCH6 92 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 E9PLN8 166 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 RNF103O00237 685 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ZNF213O14771 459 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 PAGE4O60829 102 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 DIAPH2O60879 1101 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CBFA2T3O75081 653 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 SOCS5O75159 536 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 AVILO75366 819 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CAMTA2O94983 1202 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 IPO7O95373 1038 aaKnown RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 GCNT3O95395 438 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 SRCP12931 536 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 HGFP14210 728 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 TMEM11P17152 192 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 TFEBP19484 476 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 KCNA5P22460 613 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 MMP8P22894 467 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CD6P30203 668 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 HOXA11P31270 313 aaPredicted RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 HOXA13P31271 388 aaPredicted RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 UQCRC1P31930 480 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 HNF1BP35680 557 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CASP3P42574 277 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 PSMC4P43686 418 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CCR10P46092 362 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 GCLCP48506 637 aaPredicted RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 MTHFSP49914 203 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 NPY4RP50391 375 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 RAB28P51157 221 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 DGKQP52824 942 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CAPZA1P52907 286 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 SLC26A5P58743 744 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 STARD6P59095 220 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 RAP2BP61225 183 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 RPL15P61313 204 aaKnown RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 MRPS5P82675 430 aaKnown RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ARHGAP8P85298 464 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 HTD2P86397 168 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ZBTB16Q05516 673 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 TEFQ10587 303 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CSTF3Q12996 717 aaKnown RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 SEMA3BQ13214 749 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 TUBB3Q13509 450 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ITGA7Q13683 1181 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 TUBB2AQ13885 445 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 MEP1BQ16820 701 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ALG11Q2TAA5 492 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 PTCHD3Q3KNS1 767 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ZSCAN23Q3MJ62 389 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 PDCD4Q53EL6 469 aaKnown RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 TMEM196Q5HYL7 178 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 FAM171A1Q5VUB5 890 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 SFRP4Q6FHJ7 346 aaPredicted RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 TMEM81Q6P7N7 255 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 DOK3Q7L591 496 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 GPRIN1Q7Z2K8 1008 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 SLC46A3Q7Z3Q1 461 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 PPP1R42Q7Z4L9 355 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 PEX5LQ8IYB4 626 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 RNF168Q8IYW5 571 aaPredicted RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 FAM185AQ8N0U4 392 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 MINDY1Q8N5J2 469 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 IL17RCQ8NAC3 791 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ZBTB44Q8NCP5 570 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 C11orf65Q8NCR3 313 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 SEMA6DQ8NFY4 1073 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CADM4Q8NFZ8 388 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ZFP28Q8NHY6 868 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 SLC35B2Q8TB61 432 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CNOT9Q92600 299 aaKnown RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ERO1AQ96HE7 468 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ZBTB45Q96K62 511 aaPredicted RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 DGAT2Q96PD7 388 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 TRIB1Q96RU8 372 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 NPAS1Q99742 590 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 VKORC1Q9BQB6 163 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 MLPHQ9BV36 600 aaPredicted RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 TUBB2BQ9BVA1 445 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 KIFC3Q9BVG8 833 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 PTDSS2Q9BVG9 487 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 STRA6Q9BX79 667 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 NPLQ9BXD5 320 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms