RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 SPECC1LQ69YQ0 1117 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 NLRP14Q86W24 1093 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 ZNF354CQ86Y25 554 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 XYLT1Q86Y38 959 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CACNA2D3Q8IZS8 1091 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 AGBL5Q8NDL9 886 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 HMCESQ96FZ2 354 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 PDXPQ96GD0 296 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 SLC45A3Q96JT2 553 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 DPYSL5Q9BPU6 564 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 NCAPGQ9BPX3 1015 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 DDA1Q9BW61 102 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 LRRC4CQ9HCJ2 640 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 DNAI1Q9UI46 699 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 OR1A2Q9Y585 309 aa12.29□□□□□ -0.44
CDK5RAP3-216ENST00000579853 RHPN2P1A8MT19 583 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 B4DGG1 531 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 AGRPO00253 132 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CCL4P13236 92 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 SLC9A1P19634 815 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CSTF2P33240 577 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 ADRA1BP35368 520 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 UGT1A3P35503 534 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 STAT1P42224 750 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 GPR3P46089 330 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 LIG3P49916 1009 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 RAB15P59190 212 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 PAK1Q13153 545 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 AMZ1Q400G9 498 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CFAP58Q5T655 872 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 ISM2Q6H9L7 571 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 BRAT1Q6PJG6 821 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 TMPRSS9Q7Z410 1059 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 SLC47A2Q86VL8 602 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 ATCAYQ86WG3 371 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 JPH3Q8WXH2 748 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 KIAA1143Q96AT1 154 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 TBC1D31Q96DN5 1066 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CFAP57Q96MR6 1250 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 ZNF641Q96N77 438 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 TEFMQ96QE5 360 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 RDH14Q9HBH5 336 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 NDFIP2Q9NV92 336 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 MAN1B1Q9UKM7 699 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 CTNND2Q9UQB3 1225 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 COQ6Q9Y2Z9 468 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 DAAM1Q9Y4D1 1078 aa12.28□□□□□ -0.44
CDK5RAP3-216ENST00000579853 IGHV5-10-1A0A0J9YXX1 117 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TSPAN11A1L157 253 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 B4GAT1O43505 415 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 LSM8O95777 96 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PCCBP05166 539 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FGF3P11487 239 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 LIFP15018 202 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ITIH2P19823 946 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ALDH4A1P30038 563 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 CLCN1P35523 988 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 LIMK2P53671 638 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 YBEYP58557 167 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 MC1RQ01726 317 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 BIRC2Q13490 618 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 SEPT6Q14141 434 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 NR1D2Q14995 579 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ZNF438Q7Z4V0 828 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 DNAAF5Q86Y56 855 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 APOBEC4Q8WW27 367 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 OR1E3Q8WZA6 343 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FUBP1Q96AE4 644 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TMEM168Q9H0V1 697 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 SUV39H2Q9H5I1 410 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 GDPD2Q9HCC8 539 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FGF22Q9HCT0 170 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PCDH12Q9NPG4 1184 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PLCB1Q9NQ66 1216 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TMEM59LQ9UK28 342 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 POLQO75417 2590 aa12.27□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TMEM202A6NGA9 273 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 B4E171 279 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FOXN3O00409 490 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 LRIG2O94898 1065 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 PON1P27169 355 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 MAN1A1P33908 653 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TRIM23P36406 574 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 MMP12P39900 470 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TSPAN7P41732 249 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 STX17P56962 302 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ATP11AP98196 1134 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ILF3Q12906 894 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 KLRB1Q12918 225 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 SQSTM1Q13501 440 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 LACTB2Q53H82 288 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 DCAF12Q5T6F0 453 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 LEKR1Q6ZMV7 388 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 C17orf82Q86X59 251 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 FAM71AQ8IYT1 594 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 RCBTB1Q8NDN9 531 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 OR4D9Q8NGE8 314 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 ART4Q93070 314 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 TUBGCP5Q96RT8 1024 aa12.26□□□□□ -0.45
CDK5RAP3-216ENST00000579853 GSDMCQ9BYG8 508 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 661.6 ms