RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ACADVLP49748 655 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 PPIDQ08752 370 aaKnown RBP14.91□□□□□ -0.02
SS18-212ENST00000579061 TRAF2Q12933 501 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 EIF2B5Q13144 721 aaKnown RBP14.91□□□□□ -0.02
SS18-212ENST00000579061 ILKQ13418 452 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 MTM1Q13496 603 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 WSCD2Q2TBF2 565 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 PROX2Q3B8N5 592 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 ODF2Q5BJF6 829 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 TPRG1LQ5T0D9 272 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 ARMC12Q5T9G4 340 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 UNQ6494/PRO21346Q6UXR6 183 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 MACC1Q6ZN28 852 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 CCDC13Q8IYE1 715 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 PLD5Q8N7P1 536 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.91□□□□□ -0.02
SS18-212ENST00000579061 CALR3Q96L12 384 aaKnown RBP14.91□□□□□ -0.02
SS18-212ENST00000579061 SEMA3CQ99985 751 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 DUSP23Q9BVJ7 150 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 RBM22Q9NW64 420 aaKnown RBP eCLIP14.91□□□□□ -0.027e-7■■■□□ 14.8
SS18-212ENST00000579061 UCKL1Q9NWZ5 548 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 NLGN3Q9NZ94 848 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 B4GALT6Q9UBX8 382 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 ALG6Q9Y672 507 aa14.91□□□□□ -0.02
SS18-212ENST00000579061 EPN1Q9Y6I3 576 aaPredicted RBP14.91□□□□□ -0.02
SS18-212ENST00000579061 FRYQ5TBA9 3013 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 AKAP13Q12802 2813 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 LRP4O75096 1905 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 GOLGA8CPA6NN73 597 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 TRIM38O00635 465 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 APOL1O14791 398 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 SIGLEC6O43699 453 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 RFPL3O75679 317 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 NEBLO76041 1014 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 RECQL5O94762 991 aaPredicted RBP14.9□□□□□ -0.02
SS18-212ENST00000579061 NDUFA10O95299 355 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 PGLSO95336 258 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 MAP3K6O95382 1288 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 KRT1P04264 644 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 PRKCGP05129 697 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 PROS1P07225 676 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 GIMD1P0DJR0 217 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 KRT10P13645 584 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 JUNDP17535 347 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 ACP1P24666 158 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 VIPR1P32241 457 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 PDK1Q15118 436 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 TAZQ16635 292 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 CCNI2Q6ZMN8 369 aaPredicted RBP14.9□□□□□ -0.02
SS18-212ENST00000579061 NDUFAF2Q8N183 169 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 CBARPQ8N350 705 aaPredicted RBP14.9□□□□□ -0.02
SS18-212ENST00000579061 FAM181AQ8N9Y4 354 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 ZNF548Q8NEK5 533 aaPredicted RBP14.9□□□□□ -0.02
SS18-212ENST00000579061 ATL2Q8NHH9 583 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 PDCD6IPQ8WUM4 868 aaKnown RBP14.9□□□□□ -0.02
SS18-212ENST00000579061 SCRN2Q96FV2 425 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 MCCC1Q96RQ3 725 aaPredicted RBP14.9□□□□□ -0.02
SS18-212ENST00000579061 APOOQ9BUR5 198 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 BRD8Q9H0E9 1235 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 USP29Q9HBJ7 922 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 KLF15Q9UIH9 416 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 RAI2Q9Y5P3 530 aa14.9□□□□□ -0.02
SS18-212ENST00000579061 PSMD11O00231 422 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 TPP1O14773 563 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 AQP9O43315 295 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 FZD6O60353 706 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 HEXIM1O94992 359 aaKnown RBP14.89□□□□□ -0.03
SS18-212ENST00000579061 IPO7O95373 1038 aaKnown RBP14.89□□□□□ -0.03
SS18-212ENST00000579061 HOXC4P09017 264 aaPredicted RBP14.89□□□□□ -0.03
SS18-212ENST00000579061 CA4P22748 312 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 HTR1BP28222 390 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 BLKP51451 505 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 IFI35P80217 286 aaPredicted RBP14.89□□□□□ -0.03
SS18-212ENST00000579061 SEMG2Q02383 582 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 ITKQ08881 620 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 DNAJC3Q13217 504 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 SMAD1Q15797 465 aaKnown RBP14.89□□□□□ -0.03
SS18-212ENST00000579061 ZNF542PQ5EBM4 170 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 C11orf63Q6NUN7 778 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 ESRP1Q6NXG1 681 aaKnown RBP14.89□□□□□ -0.03
SS18-212ENST00000579061 BZW1Q7L1Q6 419 aaKnown RBP14.89□□□□□ -0.03
SS18-212ENST00000579061 PHACTR4Q8IZ21 702 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 CCNYQ8ND76 341 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 TPCN2Q8NHX9 752 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 PIH1D2Q8WWB5 315 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 COQ10AQ96MF6 247 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 IL12RB2Q99665 862 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 EVA1BQ9NVM1 165 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 SPASTQ9UBP0 616 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 HEY1Q9Y5J3 304 aa14.89□□□□□ -0.03
SS18-212ENST00000579061 SOWAHDA6NJG2 315 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 BTNL10A8MVZ5 291 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 C1QTNF9BB2RNN3 333 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 K7ESM1 405 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 PPP1R12AO14974 1030 aaPredicted RBP14.88□□□□□ -0.03
SS18-212ENST00000579061 HLA-DQB2P05538 268 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 C1QTNF9P0C862 333 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 GM2AP17900 193 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 CDC25BP30305 580 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 TRIM23P36406 574 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms