RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 ZFR2Q9UPR6 939 aaKnown RBP4.05□□□□□ -1.76
PTPRM-206ENST00000578093 NAALADL1Q9UQQ1 740 aa4.05□□□□□ -1.76
PTPRM-206ENST00000578093 TRAF3IP3Q9Y228 551 aa4.05□□□□□ -1.76
PTPRM-206ENST00000578093 ENTPD2Q9Y5L3 495 aa4.05□□□□□ -1.76
PTPRM-206ENST00000578093 SPTAN1Q13813 2472 aaKnown RBP4.05□□□□□ -1.76
PTPRM-206ENST00000578093 NBASA2RRP1 2371 aa4.05□□□□□ -1.76
PTPRM-206ENST00000578093 USP9YO00507 2555 aaPredicted RBP4.05□□□□□ -1.76
PTPRM-206ENST00000578093 A0A1B0GVL5 298 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 A0A1W2PQU0 124 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 CDRT15L2A8MXV6 281 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 K7ESM1 405 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 M0QYV0 167 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 MAPK13O15264 365 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SHOXO15266 292 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 RAD51BO15315 384 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SLC31A1O15431 190 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 IRAK2O43187 625 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 CALUO43852 315 aaPredicted RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 MED26O95402 600 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 IGLV3-25P01717 112 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 LTFP02788 710 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SETSIPP0DME0 302 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 CD8BP10966 210 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 PFKFB1P16118 471 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 ITGB6P18564 788 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 TRIM21P19474 475 aaKnown RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 PDCP20941 246 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 TACR2P21452 398 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 LSSP48449 732 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SLC11A2P49281 568 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 UCNP55089 124 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 ERVPABLB-1P60509 514 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 ECT2LQ008S8 904 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 EGR3Q06889 387 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 LRMPQ12912 555 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 FGL2Q14314 439 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 TGIF1Q15583 401 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 NFIL3Q16649 462 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 CDKN3Q16667 212 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 ZNF284Q2VY69 593 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 ZSCAN23Q3MJ62 389 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SETMARQ53H47 684 aaPredicted RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SLC45A4Q5BKX6 768 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 COLEC12Q5KU26 742 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SYPL2Q5VXT5 272 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 NUGGCQ68CJ6 796 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SEL1L3Q68CR1 1132 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 KRT39Q6A163 491 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SPOCD1Q6ZMY3 1216 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 INTS8Q75QN2 995 aaKnown RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 EFL1Q7Z2Z2 1120 aaKnown RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 PRPF39Q86UA1 669 aaKnown RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 CHSY1Q86X52 802 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 RBFAQ8N0V3 343 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 LGI2Q8N0V4 545 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 CCAR2Q8N163 923 aaKnown RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SCML4Q8N228 414 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 KDM1BQ8NB78 822 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 CHST14Q8NCH0 376 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 LRRN4CLQ8ND94 238 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 BVESQ8NE79 360 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 FBXL13Q8NEE6 735 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 ZNF548Q8NEK5 533 aaPredicted RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 ADCY4Q8NFM4 1077 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 MAPK15Q8TD08 544 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SLC35F5Q8WV83 523 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 KCTD13Q8WZ19 329 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 EXTL1Q92935 676 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SKA1Q96BD8 255 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 ALG14Q96F25 216 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SGSM3Q96HU1 749 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 SPAG5Q96R06 1193 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 PRMT1Q99873 361 aaKnown RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 MIS12Q9H081 205 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 TCEAL2Q9H3H9 227 aaPredicted RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 ZSCAN16Q9H4T2 348 aaPredicted RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 CARS2Q9HA77 564 aaKnown RBP4.04□□□□□ -1.76
PTPRM-206ENST00000578093 CNGB3Q9NQW8 809 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 THSD1Q9NS62 852 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 GPR27Q9NS67 375 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 KLHL11Q9NVR0 708 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 TCFL5Q9UL49 500 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 DMTF1Q9Y222 760 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 FRMD4BQ9Y2L6 1034 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 CEP83Q9Y592 693 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 CRYBG3Q68DQ2 2970 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 UNC79Q9P2D8 2635 aa4.04□□□□□ -1.76
PTPRM-206ENST00000578093 ZNF106Q9H2Y7 1883 aaKnown RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 ARHGEF17Q96PE2 2063 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 TYW5A2RUC4 315 aaKnown RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 CPED1A4D0V7 1026 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 TRIM49BA6NDI0 452 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 POM121BA6NF01 834 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 TCAF2A6NFQ2 919 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 CAPN8A6NHC0 703 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 PRAMEF26H0Y7S4 382 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 I6L893 689 aaPredicted RBP4.03□□□□□ -1.76
PTPRM-206ENST00000578093 K7ERQ8 282 aa4.03□□□□□ -1.76
PTPRM-206ENST00000578093 SLC7A4O43246 635 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms