RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 PEX11BO96011 259 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 SERPINC1P01008 464 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 SERPING1P05155 500 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 TSHRP16473 764 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 HNRNPH3P31942 346 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 UCNP55089 124 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 CDH6P55285 790 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 SEMG2Q02383 582 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 LBRQ14739 615 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 PPP6R3Q5H9R7 873 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 FAXCQ5TGI0 409 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 CAVIN1Q6NZI2 390 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 TMCO3Q6UWJ1 677 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 LIPIQ6XZB0 460 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 RBM44Q6ZP01 1051 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 SLC35F3Q8IY50 421 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 BBS5Q8N3I7 341 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 NPWQ8N729 165 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 ARL10Q8N8L6 244 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 ZNF248Q8NDW4 579 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 SNRNP27Q8WVK2 155 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 HNRNPLLQ8WVV9 542 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 CELF6Q96J87 481 aaKnown RBP14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 EXOC2Q96KP1 924 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 WDR92Q96MX6 357 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 NUDCD1Q96RS6 583 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 UBL7Q96S82 380 aaPredicted RBP14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 MGME1Q9BQP7 344 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 TRIM7Q9C029 511 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 CLPBQ9H078 707 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 GPATCH2LQ9NWQ4 482 aa14.58□□□□□ -0.08
SMARCE1-213ENST00000578044 NTN3O00634 580 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 ATMINO43313 823 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 MAFKO60675 156 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 CSO75390 466 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 CYP1A2P05177 515 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 PTMSP20962 102 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 CES1P23141 567 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 RGRP47804 291 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 ADKP55263 362 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 PCBP4P57723 403 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 SKOR1P84550 965 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 RALGDSQ12967 914 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 EIF3IQ13347 325 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 INPP5AQ14642 412 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 TSR1Q2NL82 804 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 ALG11Q2TAA5 492 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 DEFB133Q30KQ1 61 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 SOWAHCQ53LP3 525 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 ALG1LQ6GMV1 187 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 GUSBP11Q6P575 273 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 OGFOD3Q6PK18 319 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 C19orf48Q6RUI8 117 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 KDM7AQ6ZMT4 941 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 NLRP8Q86W28 1048 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 ZSWIM9Q86XI8 627 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 GKN2Q86XP6 184 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 CSPG4P5Q96PW8 444 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 WRAP53Q9BUR4 548 aaKnown RBP14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 DPH1Q9BZG8 443 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 THSD1Q9NS62 852 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 PNMA8BQ9ULN7 279 aaPredicted RBP14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 PADI4Q9UM07 663 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 CFAP46Q8IYW2 2715 aa14.57□□□□□ -0.08
SMARCE1-213ENST00000578044 USP12O75317 370 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 RECQL5O94762 991 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 ELFN1P0C7U0 828 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 TGM2P21980 687 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 IL1R2P27930 398 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 CLDN6P56747 220 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 SRP54P61011 504 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 FANCCQ00597 558 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 CLPPQ16740 277 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 EFL1Q7Z2Z2 1120 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 RBFAQ8N0V3 343 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 TEX26Q8N6G2 289 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 CCDC97Q96F63 343 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 WBP1Q96G27 269 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 LIN37Q96GY3 246 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 COQ10AQ96MF6 247 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 MCCC1Q96RQ3 725 aaPredicted RBP14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 ASCL3Q9NQ33 180 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 HAUS2Q9NVX0 235 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 APPL1Q9UKG1 709 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 RALYQ9UKM9 306 aaKnown RBP14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 PHTF1Q9UMS5 762 aa14.56□□□□□ -0.08
SMARCE1-213ENST00000578044 TEX51A0A1B0GUA7 166 aa14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 MYO1FO00160 1098 aa14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 DFFAO00273 331 aa14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 CACNB4O00305 520 aaPredicted RBP14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 TNFP01375 233 aa14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 RARAP10276 462 aa14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 KRT10P13645 584 aa14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 CTSEP14091 401 aa14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 ITIH2P19823 946 aa14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 SCNN1BP51168 640 aa14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 UBASH3AP57075 661 aa14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 SLC25A11Q02978 314 aaKnown RBP14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 TLE3Q04726 772 aa14.55□□□□□ -0.08
SMARCE1-213ENST00000578044 DPTQ07507 201 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms