RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 CCDC3Q9BQI4 270 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 EDEM3Q9BZQ6 932 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 CWC15Q9P013 229 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 KLQ9UEF7 1012 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PADI4Q9UM07 663 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SATB2Q9UPW6 733 aa16.74■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ARHGEF17Q96PE2 2063 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ATMQ13315 3056 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 CFAP69A5D8W1 941 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ALPIP09923 528 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 MYBL1P10243 752 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SRP54P61011 504 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 BCL2L1Q07817 233 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 NSUN2Q08J23 767 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 TCEA2Q15560 299 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 TMCO4Q5TGY1 634 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ESRP1Q6NXG1 681 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 LVRNQ6Q4G3 990 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ENPP7Q6UWV6 458 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PLA2G15Q8NCC3 412 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ATL2Q8NHH9 583 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 WDR48Q8TAF3 677 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 TRIM11Q96F44 468 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 NAF1Q96HR8 494 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 WDR92Q96MX6 357 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 NAP1L5Q96NT1 182 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PSKH2Q96QS6 385 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ZWILCHQ9H900 591 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 THSD1Q9NS62 852 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 DOLKQ9UPQ8 538 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 UNC13CQ8NB66 2214 aa16.73■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PMS2P1A4D2B8 440 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 EIF4E1BA6NMX2 242 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 TRAFD1O14545 582 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ATXN7O15265 892 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 RECQL5O94762 991 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ELFN1P0C7U0 828 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SKILP12757 684 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 CTSEP14091 401 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 TCF4P15884 667 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 GM2AP17900 193 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 IL1R2P27930 398 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PCK1P35558 622 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ZNF165P49910 485 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 KIAA1024LP59773 190 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 AP1S1P61966 158 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 DPYSL2Q16555 572 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 LIPIQ6XZB0 460 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 DPPA4Q7L190 304 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 GPR155Q7Z3F1 870 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 RD3Q7Z3Z2 195 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SDR16C5Q8N3Y7 309 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 LZTR1Q8N653 840 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SCG3Q8WXD2 468 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SPOCK2Q92563 424 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PRR11Q96HE9 360 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ISCUQ9H1K1 167 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 MRPL47Q9HD33 250 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SIRPGQ9P1W8 387 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 MYO1AQ9UBC5 1043 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SEPT3Q9UH03 358 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PCDHGA8Q9Y5G5 932 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 DGKBQ9Y6T7 804 aa16.72■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SYCE3A1L190 88 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 H3BRJ5 948 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 NTN3O00634 580 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 PEX11BO96011 259 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SCNN1BP51168 640 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SLC10A7Q0GE19 358 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SPIDRQ14159 915 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 LBRQ14739 615 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 IQCB1Q15051 598 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SMTNL2Q2TAL5 461 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ZSCAN23Q3MJ62 389 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 GKN2Q86XP6 184 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 KCNE4Q8WWG9 221 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 OR1E3Q8WZA6 343 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 FUBP1Q96AE4 644 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 CCDC74AQ96AQ1 378 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ZNF599Q96NL3 588 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 RBM15Q96T37 977 aaKnown RBP eCLIP16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 SYNDIG1Q9H7V2 258 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 FGF22Q9HCT0 170 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 GULP1Q9UBP9 304 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 RABGEF1Q9UJ41 708 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 GPR34Q9UPC5 381 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 ZNF462Q96JM2 2506 aa16.71■□□□□ 0.27
CDK5RAP3-206ENST00000578018 TEX51A0A1B0GUA7 166 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TMEM202A6NGA9 273 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CACNB4O00305 520 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CR2P20023 1033 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 ARL4AP40617 200 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 RENBPP51606 427 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 POLR2LP62875 67 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 CXADRP78310 365 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 SKOR1P84550 965 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 ZNF235Q14590 738 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 NR1I3Q14994 352 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 FIGNQ5HY92 759 aa16.7■□□□□ 0.26
CDK5RAP3-206ENST00000578018 TMCO3Q6UWJ1 677 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms