RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 H3BRJ5 948 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 ELFN1P0C7U0 828 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 PCK1P35558 622 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 DPYSQ14117 519 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 LBRQ14739 615 aaKnown RBP15.02■□□□□ -0
RN7SL560P-201ENST00000577943 NR1I3Q14994 352 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 IQCB1Q15051 598 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 AGERQ15109 404 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 ALG11Q2TAA5 492 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 TMCO4Q5TGY1 634 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 LVRNQ6Q4G3 990 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 LIPIQ6XZB0 460 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 GKN2Q86XP6 184 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 SPACA3Q8IXA5 215 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 TP53INP2Q8IXH6 220 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 PCDH19Q8TAB3 1148 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 WDR48Q8TAF3 677 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 HSPH1Q92598 858 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 GRAMD1AQ96CP6 724 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 ECHDC3Q96DC8 303 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 WDR92Q96MX6 357 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 FCRL3Q96P31 734 aaPredicted RBP15.02■□□□□ -0
RN7SL560P-201ENST00000577943 UBL7Q96S82 380 aaPredicted RBP15.02■□□□□ -0
RN7SL560P-201ENST00000577943 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.02■□□□□ -0
RN7SL560P-201ENST00000577943 SYNDIG1Q9H7V2 258 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 SIRPGQ9P1W8 387 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 SATB2Q9UPW6 733 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 ENTPD2Q9Y5L3 495 aa15.02■□□□□ -0
RN7SL560P-201ENST00000577943 IGSF10Q6WRI0 2623 aa15.02□□□□□ -0.01
RN7SL560P-201ENST00000577943 SMG1Q96Q15 3661 aaKnown RBP15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 A8MX80 341 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 TCEA3O75764 348 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 DXOO77932 396 aaKnown RBP15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 RECQL5O94762 991 aaPredicted RBP15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 TNFP01375 233 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 AMPD1P23109 780 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 IL1R2P27930 398 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 ERVPABLB-1P60509 514 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 AP1S1P61966 158 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 TPM4P67936 248 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 SLC10A7Q0GE19 358 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 RALGDSQ12967 914 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 SPIDRQ14159 915 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 ZNF235Q14590 738 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 DPYSL2Q16555 572 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 BOLA3Q53S33 107 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 FIGNQ5HY92 759 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 TMCO3Q6UWJ1 677 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 SDR16C5Q8N3Y7 309 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 ARL10Q8N8L6 244 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 PLA2G15Q8NCC3 412 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 ATXN7L3BQ96GX2 97 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 ZNF599Q96NL3 588 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 PSKH2Q96QS6 385 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 CCDC3Q9BQI4 270 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 THSD1Q9NS62 852 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 GPR34Q9UPC5 381 aa15.01□□□□□ -0.01
RN7SL560P-201ENST00000577943 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15□□□□□ -0.01
RN7SL560P-201ENST00000577943 TTC24A2A3L6 582 aaPredicted RBP15□□□□□ -0.01
RN7SL560P-201ENST00000577943 CACNB4O00305 520 aaPredicted RBP15□□□□□ -0.01
RN7SL560P-201ENST00000577943 TRAFD1O14545 582 aaPredicted RBP15□□□□□ -0.01
RN7SL560P-201ENST00000577943 TCF4P15884 667 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 RBMS1P29558 406 aaKnown RBP15□□□□□ -0.01
RN7SL560P-201ENST00000577943 TLE3Q04726 772 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 PIGHQ14442 188 aaPredicted RBP15□□□□□ -0.01
RN7SL560P-201ENST00000577943 ACOX1Q15067 660 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 BROXQ5VW32 411 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 FOXR1Q6PIV2 292 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 DPPA4Q7L190 304 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 POLNQ7Z5Q5 900 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 BBS5Q8N3I7 341 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 PDCD6IPQ8WUM4 868 aaKnown RBP15□□□□□ -0.01
RN7SL560P-201ENST00000577943 PDXPQ96GD0 296 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 HIC2Q96JB3 615 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 FUCA2Q9BTY2 467 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 STAU2Q9NUL3 570 aaKnown RBP eCLIP15□□□□□ -0.01
RN7SL560P-201ENST00000577943 ETNK2Q9NVF9 386 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 BZW2Q9Y6E2 419 aaKnown RBP15□□□□□ -0.01
RN7SL560P-201ENST00000577943 SCN8AQ9UQD0 1980 aa15□□□□□ -0.01
RN7SL560P-201ENST00000577943 CASC3O15234 703 aaKnown RBP14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 RARAP10276 462 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 KELP23276 732 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 HSPA9P38646 679 aaKnown RBP14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 KIAA1024LP59773 190 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 CXADRP78310 365 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 FANCCQ00597 558 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 NYAP1Q6ZVC0 841 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 GPR155Q7Z3F1 870 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 KYQ8NBH2 561 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 OR56A4Q8NGH8 313 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 NSMCE1Q8WV22 266 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 CPLX3Q8WVH0 158 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 KCNE4Q8WWG9 221 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 FUBP1Q96AE4 644 aaKnown RBP14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 CCDC74AQ96AQ1 378 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 NSMCE3Q96MG7 304 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 CSPG4P5Q96PW8 444 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 THAP2Q9H0W7 228 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 ASCL3Q9NQ33 180 aa14.99□□□□□ -0.01
RN7SL560P-201ENST00000577943 B4GALT6Q9UBX8 382 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms