RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 PXDNQ92626 1479 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 E2F8A0AVK6 867 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM220BPB1ANY3 271 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 E9PBE3 544 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GOLGA8RI6L899 631 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RNF103O00237 685 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SCAMP1O15126 338 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 DCXO43602 365 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CYTH3O43739 400 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SH3BGRLO75368 114 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CNTN5O94779 1100 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 NOL4O94818 638 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 LDOC1O95751 146 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 KRT8P05787 483 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ABCB1P08183 1280 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SLURP2P0DP57 97 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CTSAP10619 480 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 TYRP14679 529 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC7A1P30825 629 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SEPHS1P49903 392 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CASP9P55211 416 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SEMG2Q02383 582 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 LPIN1Q14693 890 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 VPS26BQ4G0F5 336 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 C2CD6Q53TS8 623 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ADGRF1Q5T601 910 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MROH9Q5TGP6 573 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 HGSNATQ68CP4 663 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 KCTD16Q68DU8 428 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF470Q6ECI4 717 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 NEPROQ6NW34 567 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GJB7Q6PEY0 223 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SPOCD1Q6ZMY3 1216 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RASGRP2Q7LDG7 609 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PIM3Q86V86 326 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SPATS2Q86XZ4 545 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 DNAAF5Q86Y56 855 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SYT12Q8IV01 421 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC9A9Q8IVB4 645 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 DENND6AQ8IWF6 608 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CFAP206Q8IYR0 622 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SAMD14Q8IZD0 417 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PLA2G15Q8NCC3 412 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 C3orf20Q8ND61 904 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RIN3Q8TB24 985 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PMEPA1Q969W9 287 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 NUS1Q96E22 293 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MSANTD3Q96H12 275 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 KAZALD1Q96I82 304 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 DEPDC7Q96QD5 511 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MAP3K3Q99759 626 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 HGH1Q9BTY7 390 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PDZD7Q9H5P4 517 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RNF121Q9H920 327 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 NPHS2Q9NP85 383 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MED4Q9NPJ6 270 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ACSS2Q9NR19 701 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 IMPAD1Q9NX62 359 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GGA2Q9UJY4 613 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PHTF1Q9UMS5 762 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SCML1Q9UN30 329 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CFL2Q9Y281 166 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RBM7Q9Y580 266 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PCDHA3Q9Y5H8 950 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 MAFBQ9Y5Q3 323 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CYP3A7-CYP3A51PA0A087WV96 503 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 WASHC1A8K0Z3 465 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 B2RBV5 119 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 WASH3PC4AMC7 463 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 RGS14O43566 566 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 DLX3O60479 287 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 GLRA3O75311 464 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 C22orf31O95567 290 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 DLDP09622 509 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 FGRP09769 529 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 BMP4P12644 408 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CYBAP13498 195 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 ACP5P13686 325 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 VAV1P15498 845 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 JUNDP17535 347 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 NT5EP21589 574 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CYP3A7P24462 503 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PON1P27169 355 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CRABP2P29373 138 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CLCN1P35523 988 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 HSD17B2P37059 387 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 TNFSF9P41273 254 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 NUDT2P50583 147 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 CCT8P50990 548 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC13A2Q13183 592 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PTPRNQ16849 979 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PARP6Q2NL67 630 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 LSM12Q3MHD2 195 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 XKR6Q5GH73 641 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 PCID2Q5JVF3 399 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 LDLRAP1Q5SW96 308 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 DUPD1Q68J44 220 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 C11orf88Q6PI97 169 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 WDR59Q6PJI9 974 aa2.94□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM151BQ6UXP7 276 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms