RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 HCN2Q9UL51 889 aa15.35■□□□□ 0.05
SS18-206ENST00000577572 ZCWPW2A0A1B0GU75 182 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 SLC7A4O43246 635 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 LDB2O43679 373 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 SYNCRIPO60506 623 aaKnown RBP15.34■□□□□ 0.05
SS18-206ENST00000577572 SIN3BO75182 1162 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 BANF1O75531 89 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 LEFTY1O75610 366 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 PIGNO95427 931 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 UGT2B4P06133 528 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 ITGB7P26010 798 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 HMGCLP35914 325 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 HADHAP40939 763 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 MGAT5Q09328 741 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 SFSWAPQ12872 951 aaKnown RBP15.34■□□□□ 0.05
SS18-206ENST00000577572 CCINQ13939 588 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 PON2Q15165 354 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 LONRF1Q17RB8 773 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 ARSIQ5FYB1 569 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 EOGTQ5NDL2 527 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 TPRG1Q6ZUI0 275 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 PAF1Q8N7H5 531 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 OR6K2Q8NGY2 324 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 CALML6Q8TD86 181 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 EZH1Q92800 747 aaPredicted RBP15.34■□□□□ 0.05
SS18-206ENST00000577572 RAB7BQ96AH8 199 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 CFAP36Q96G28 342 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 ZIM3Q96PE6 472 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 FAM129BQ96TA1 746 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 RSPH9Q9H1X1 276 aaPredicted RBP15.34■□□□□ 0.05
SS18-206ENST00000577572 PLAC1Q9HBJ0 212 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 PRSS16Q9NQE7 514 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 VPS18Q9P253 973 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 RABGEF1Q9UJ41 708 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 SCML1Q9UN30 329 aa15.34■□□□□ 0.05
SS18-206ENST00000577572 MUC22E2RYF6 1773 aaPredicted RBP15.34■□□□□ 0.05
SS18-206ENST00000577572 GOLGA6L10A6NI86 522 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 FAM159BA6NKW6 160 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 NARSO43776 548 aaKnown RBP15.33■□□□□ 0.04
SS18-206ENST00000577572 BNIP3LO60238 219 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 CDH16O75309 829 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 SASH3O75995 380 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 ADH1BP00325 375 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 EGFP01133 1207 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 EPHX1P07099 455 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 CYP2A6P11509 494 aaPredicted RBP15.33■□□□□ 0.04
SS18-206ENST00000577572 ZNF30P17039 623 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 LPOP22079 712 aaPredicted RBP15.33■□□□□ 0.04
SS18-206ENST00000577572 STARD6P59095 220 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 CRADDP78560 199 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 ZBTB16Q05516 673 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 LRRC32Q14392 662 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 UGP2Q16851 508 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 HP1BP3Q5SSJ5 553 aaPredicted RBP15.33■□□□□ 0.04
SS18-206ENST00000577572 GLT6D1Q7Z4J2 308 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 LRRC6Q86X45 466 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 STK40Q8N2I9 435 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 GOLGA6L1Q8N7Z2 621 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 BLOC1S5Q8TDH9 187 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 FBF1Q8TES7 1133 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 ZNF669Q96BR6 464 aaPredicted RBP15.33■□□□□ 0.04
SS18-206ENST00000577572 CERS2Q96G23 380 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 KLHL32Q96NJ5 620 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 HDAC8Q9BY41 377 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 CDH19Q9H159 772 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 STMN4Q9H169 189 aaPredicted RBP15.33■□□□□ 0.04
SS18-206ENST00000577572 MED4Q9NPJ6 270 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 RAD18Q9NS91 495 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 NLE1Q9NVX2 485 aaPredicted RBP15.33■□□□□ 0.04
SS18-206ENST00000577572 PIH1D1Q9NWS0 290 aaKnown RBP15.33■□□□□ 0.04
SS18-206ENST00000577572 CACNA2D2Q9NY47 1150 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 TICRRQ7Z2Z1 1910 aa15.33■□□□□ 0.04
SS18-206ENST00000577572 EXOC1LA0A1B0GW35 172 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 RGSL1A5PLK6 1076 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 UPK3BL1B0FP48 263 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 UPK3BL2E5RIL1 263 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 H0Y858 1186 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 H7C0S8 307 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 RASGRF2O14827 1237 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 C1QAP02745 245 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 CTSLP07711 333 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 C5AR1P21730 350 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 CNTFP26441 200 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 GKP32189 559 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 ZNF140P52738 457 aaPredicted RBP15.32■□□□□ 0.04
SS18-206ENST00000577572 ZNF844Q08AG5 666 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 ELP6Q0PNE2 266 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 MTM1Q13496 603 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 SEPT6Q14141 434 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 ERAP2Q6P179 960 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 KIAA0408Q6ZU52 694 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 GALNT7Q86SF2 657 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 SLC26A11Q86WA9 606 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 SFTPA1Q8IWL2 248 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 CNTN4Q8IWV2 1026 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 CBARPQ8N350 705 aaPredicted RBP15.32■□□□□ 0.04
SS18-206ENST00000577572 IL17RCQ8NAC3 791 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 OR2T3Q8NH03 318 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 PIP4K2CQ8TBX8 421 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 GRIN3AQ8TCU5 1115 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms