RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 STXBP5Q5T5C0 1151 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 CLEC6AQ6EIG7 209 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 PAOXQ6QHF9 649 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 C17orf50Q8WW18 174 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 NODALQ96S42 347 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 AGAP2Q99490 1192 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 RAPGEFL1Q9UHV5 662 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 HACL1Q9UJ83 578 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 WBP11Q9Y2W2 641 aaKnown RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 TOR1BO14657 336 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 EI24O14681 340 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 IFNA14P01570 189 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 PRKCHP24723 683 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 PURAQ00577 322 aaKnown RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 ECT2LQ008S8 904 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 MBLAC2Q68D91 279 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 TYW3Q6IPR3 259 aaKnown RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 SLC44A2Q8IWA5 706 aaPredicted RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZFP28Q8NHY6 868 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 SPATA17Q96L03 361 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 FOPNLQ96NB1 174 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 ALG2Q9H553 416 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 CATSPERZQ9NTU4 200 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 TRMT13Q9NUP7 481 aaKnown RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 ADPRHL2Q9NX46 363 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZNF112Q9UJU3 913 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 CDV3Q9UKY7 258 aaKnown RBP13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 U3KQV3 271 aa13.17□□□□□ -0.3
PCDHGB3-201ENST00000576222 LTN1O94822 1766 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 MYOCOSA0A1B0GUC4 107 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 AREL1O15033 823 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 BCAS2O75934 225 aaPredicted RBP13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 TOP3BO95985 862 aaKnown RBP13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 NPR3P17342 541 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 MTHFRP42898 656 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 IL2P60568 153 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 SYTL3Q4VX76 610 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 SH3PXD2AQ5TCZ1 1133 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 CDHR3Q6ZTQ4 885 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 PLEKHM3Q6ZWE6 761 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 CDH24Q86UP0 819 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZNF567Q8N184 647 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 OR2T12Q8NG77 320 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 MYDGFQ969H8 173 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 SH3KBP1Q96B97 665 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 NMRK2Q9NPI5 230 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 RNF19AQ9NV58 838 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 PDLIM1O00151 329 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 TSNQ15631 228 aaKnown RBP13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 SLC25A52Q3SY17 297 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 OGFOD2Q6N063 350 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 ABHD15Q6UXT9 468 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZNF621Q6ZSS3 439 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 NCCRP1Q6ZVX7 275 aaPredicted RBP13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 C11orf74Q86VG3 221 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 FBXL18Q96ME1 805 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 PPM1MQ96MI6 270 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 PDE10AQ9Y233 779 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 ASB3Q9Y575 518 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 A0A1W2PPW3 197 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 MGAT4DA6NG13 374 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 SPATA31C2B4DYI2 1134 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 H3BRB1 525 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZBTB24O43167 697 aaPredicted RBP13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 FAM189A1O60320 539 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 RAMP2O60895 175 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 RHDQ02161 417 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 EFEMP1Q12805 493 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 PAN2Q504Q3 1202 aaKnown RBP13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 TMEM214Q6NUQ4 689 aaKnown RBP13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZNF549Q6P9A3 640 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 EPGNQ6UW88 154 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 RALGPS2Q86X27 583 aaPredicted RBP13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 TMEM126BQ8IUX1 230 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 NKAPQ8N5F7 415 aaKnown RBP13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 FNDC8Q8TC99 324 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 HDAC10Q969S8 669 aa13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 TUT1Q9H6E5 874 aaKnown RBP13.16□□□□□ -0.3
PCDHGB3-201ENST00000576222 NPHS1O60500 1241 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 CYP4B1P13584 511 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 CCNIQ14094 377 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 PLEKHG4Q58EX7 1191 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 GPRIN3Q6ZVF9 776 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 HIPK1Q86Z02 1210 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 HS6ST3Q8IZP7 471 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZNF512Q96ME7 567 aaPredicted RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 OXSMQ9NWU1 459 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ADGRE2Q9UHX3 823 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 ENOPH1Q9UHY7 261 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 PHF24Q9UPV7 400 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 TNPO3Q9Y5L0 923 aaKnown RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 SAGE2PA6NJ88 616 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 F5H5T6 163 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 SPTLC1O15269 473 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 DNAJA2O60884 412 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 RFPL1O75677 317 aa13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 CNPP09543 421 aaKnown RBP13.15□□□□□ -0.3
PCDHGB3-201ENST00000576222 PTPN1P18031 435 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms