RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SOBPA7XYQ1 873 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 TIMM44O43615 452 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 SYNCRIPO60506 623 aaKnown RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 SULT1C4O75897 302 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 MATN1P21941 496 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 PSMB9P28065 219 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 PGGT1BP53609 377 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 IST1P53990 364 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 GRM1Q13255 1194 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 FAM83EQ2M2I3 478 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 FSTL4Q6MZW2 842 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 VASH1Q7L8A9 365 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 DSG4Q86SJ6 1040 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 KIAA0319LQ8IZA0 1049 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ZNF555Q8NEP9 628 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 PPP1R13LQ8WUF5 828 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 KCTD4Q8WVF5 259 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 EFHD2Q96C19 240 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 C17orf80Q9BSJ5 609 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 HGH1Q9BTY7 390 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 NFKBIZQ9BYH8 718 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ILVBLA1L0T0 632 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ANKRD34BA5PLL1 514 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 C9IYK1 514 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 RSL1D1O76021 490 aaKnown RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ALDH2P05091 517 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 MPOP05164 745 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 C8BP07358 591 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ZNF286BP0CG31 522 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 DCKP27707 260 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 CAPRIN1Q14444 709 aaKnown RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 KIZQ2M2Z5 673 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 CST9Q5W186 159 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 MAP1SQ66K74 1059 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 C4orf22Q6V702 233 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 PAGE2Q7Z2X7 111 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 SYTL1Q8IYJ3 562 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 RYBPQ8N488 228 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 C7orf31Q8N865 590 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 NIPA2Q8N8Q9 360 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 RNF149Q8NC42 400 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 NPLOC4Q8TAT6 608 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ELMO1Q92556 727 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 HDAC10Q969S8 669 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 PGLYRP2Q96PD5 576 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ALPK1Q96QP1 1244 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 CITED4Q96RK1 184 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 TWNKQ96RR1 684 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 TP63Q9H3D4 680 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 MROH8Q9H579 483 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 LINC00854A0A1B0GVQ3 168 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 PDZK1P1A8MUH7 402 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 PDHXO00330 501 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ACOT8O14734 319 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 GUCY1B2O75343 617 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ERBB2P04626 1255 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 PCNAP12004 261 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ALOX12P18054 663 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ADCYAP1R1P41586 468 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 DAB2P98082 770 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ECT2LQ008S8 904 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 SLC12A1Q13621 1099 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 SMUG1Q53HV7 270 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 STXBP5Q5T5C0 1151 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 CYP2U1Q7Z449 544 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 ANKRD13BQ86YJ7 626 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 OR9I1Q8NGQ6 314 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 HTR3CQ8WXA8 447 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 CENPNQ96H22 339 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 REXO4Q9GZR2 422 aaKnown RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 C6orf62Q9GZU0 229 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 LRRC40Q9H9A6 602 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 CHST12Q9NRB3 414 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 RIC8BQ9NVN3 520 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 HACD3Q9P035 362 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 XPR1Q9UBH6 696 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 MORF4L1Q9UBU8 362 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 CDH7Q9ULB5 785 aa9.62□□□□□ -0.87
CCDC40-212ENST00000574799 PNMA8BQ9ULN7 279 aaPredicted RBP9.62□□□□□ -0.87
CCDC40-212ENST00000574799 C3orf70A6NLC5 250 aaPredicted RBP9.61□□□□□ -0.87
CCDC40-212ENST00000574799 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.61□□□□□ -0.87
CCDC40-212ENST00000574799 TBX1O43435 398 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 SNAP29O95721 258 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 LGALS2P05162 132 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 FCGR1AP12314 374 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 SMPD1P17405 629 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 TPH1P17752 444 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 TSPAN8P19075 237 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 ADSLP30566 484 aaPredicted RBP9.61□□□□□ -0.87
CCDC40-212ENST00000574799 IDUAP35475 653 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 TMBIM6P55061 237 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 CTBSQ01459 385 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 VAC14Q08AM6 782 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 GRB14Q14449 540 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 NHSL2Q5HYW2 709 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 IER5Q5VY09 327 aa9.61□□□□□ -0.87
CCDC40-212ENST00000574799 BTLAQ7Z6A9 289 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms