RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 MATR3P43243 847 aaKnown RBP eCLIP5.31□□□□□ -1.565e-7■■□□□ 14.4
TRIM25-208ENST00000574234 SLC16A1P53985 500 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 BMT2Q1RMZ1 405 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 ZXDCQ2QGD7 858 aaPredicted RBP5.31□□□□□ -1.56
TRIM25-208ENST00000574234 TTC22Q5TAA0 569 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 FYB2Q5VWT5 728 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 MBNL2Q5VZF2 373 aaKnown RBP5.31□□□□□ -1.56
TRIM25-208ENST00000574234 TMEM215Q68D42 235 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 ZNF776Q68DI1 518 aaPredicted RBP5.31□□□□□ -1.56
TRIM25-208ENST00000574234 PIK3AP1Q6ZUJ8 805 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 RAB11FIP2Q7L804 512 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 DSG4Q86SJ6 1040 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 MMP21Q8N119 569 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 FBXO39Q8N4B4 442 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 TMEM161BQ8NDZ6 487 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 ERMNQ8TAM6 284 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 PLEKHO2Q8TD55 490 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 LRTOMTQ8WZ04 291 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 WBP2Q969T9 261 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 UTP4Q969X6 686 aaKnown RBP5.31□□□□□ -1.56
TRIM25-208ENST00000574234 MYLPFQ96A32 169 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 ARRDC3Q96B67 414 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 P2RY11Q96G91 374 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 MPP4Q96JB8 637 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 CGRRF1Q99675 332 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 SLC2A11Q9BYW1 496 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 RSPH9Q9H1X1 276 aaPredicted RBP5.31□□□□□ -1.56
TRIM25-208ENST00000574234 PABPC3Q9H361 631 aaKnown RBP5.31□□□□□ -1.56
TRIM25-208ENST00000574234 DMRT3Q9NQL9 472 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 PRDM8Q9NQV8 689 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 UCKL1Q9NWZ5 548 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 ERVK13-1Q9NX77 482 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 GDAP2Q9NXN4 497 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 MARCH2Q9P0N8 246 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 GULP1Q9UBP9 304 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 LSM7Q9UK45 103 aaKnown RBP5.31□□□□□ -1.56
TRIM25-208ENST00000574234 TMPRSS11EQ9UL52 423 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 CDH9Q9ULB4 789 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 NAP1L2Q9ULW6 460 aaPredicted RBP5.31□□□□□ -1.56
TRIM25-208ENST00000574234 LIMCH1Q9UPQ0 1083 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 ENTPD4Q9Y227 616 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 LRP4O75096 1905 aa5.31□□□□□ -1.56
TRIM25-208ENST00000574234 A0A0B4J269 797 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 CCDC154A6NI56 674 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 LRRC10BA6NIK2 292 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 FAM90A27PA6NNH2 459 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 F8VP50 259 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 H0YCG3 227 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 NTN3O00634 580 aaPredicted RBP5.3□□□□□ -1.56
TRIM25-208ENST00000574234 SLC16A4O15374 487 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 HTRA2O43464 458 aaPredicted RBP5.3□□□□□ -1.56
TRIM25-208ENST00000574234 NEMFO60524 1076 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 BUB1BO60566 1050 aaPredicted RBP5.3□□□□□ -1.56
TRIM25-208ENST00000574234 PIGRP01833 764 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 C4BPAP04003 597 aaKnown RBP5.3□□□□□ -1.56
TRIM25-208ENST00000574234 LPLP06858 475 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 IRF1P10914 325 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 SCP2P22307 547 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 ITGB7P26010 798 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 CCKBRP32239 447 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 CASP5P51878 434 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 MAPK7Q13164 816 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 SPIDRQ14159 915 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 CCDC142Q17RM4 750 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 NKPD1Q17RQ9 610 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 PRRT3Q5FWE3 981 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 HLA-DQA1Q5Y7H0 255 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 HAUS3Q68CZ6 603 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 TLDC1Q6P9B6 456 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 Q6ZNB5 142 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 EFL1Q7Z2Z2 1120 aaKnown RBP5.3□□□□□ -1.56
TRIM25-208ENST00000574234 PHYKPLQ8IUZ5 450 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 LYSMD2Q8IV50 215 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 NUP93Q8N1F7 819 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 LRRC52Q8N7C0 313 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 CPT1CQ8TCG5 803 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 TSPEARQ8WU66 669 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 WFDC12Q8WWY7 111 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 CCT6BQ92526 530 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 TMEM159Q96B96 161 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 PCED1BQ96HM7 432 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 TBATAQ96M53 351 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 TIPINQ9BVW5 301 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 AGXT2Q9BYV1 514 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 CIPCQ9C0C6 399 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 STRADBQ9C0K7 418 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 NACA2Q9H009 215 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 VPS11Q9H270 941 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 POLD4Q9HCU8 107 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 PRSS16Q9NQE7 514 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 COMMD8Q9NX08 183 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 FBXL12Q9NXK8 326 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 PLK2Q9NYY3 685 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 GPRC5BQ9NZH0 403 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 IL37Q9NZH6 218 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 ARHGAP20Q9P2F6 1191 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 SEL1LQ9UBV2 794 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 SERGEFQ9UGK8 458 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 PLA2G4CQ9UP65 541 aa5.3□□□□□ -1.56
TRIM25-208ENST00000574234 COA3Q9Y2R0 106 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms