RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 OPA1O60313 960 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 SOCS5O75159 536 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 RECQL5O94762 991 aaPredicted RBP17.51■□□□□ 0.39
SMG6-214ENST00000573827 GP1BAP07359 652 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 ALPPL2P10696 532 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 HNF1BP35680 557 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 THOP1P52888 689 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 DAB2P98082 770 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 E2F1Q01094 437 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 GALNT2Q10471 571 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 INPP5AQ14642 412 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 NFATC4Q14934 902 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 RTP5Q14D33 572 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 PAFAH1B3Q15102 231 aaKnown RBP17.51■□□□□ 0.39
SMG6-214ENST00000573827 ALG11Q2TAA5 492 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 DEFB133Q30KQ1 61 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 ZCCHC8Q6NZY4 707 aaKnown RBP17.51■□□□□ 0.39
SMG6-214ENST00000573827 ATPAF2Q8N5M1 289 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 LMX1AQ8TE12 382 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 MAML1Q92585 1016 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 COQ10AQ96MF6 247 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 APOOQ9BUR5 198 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 B4GALT6Q9UBX8 382 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 APOBEC3BQ9UH17 382 aaKnown RBP17.51■□□□□ 0.39
SMG6-214ENST00000573827 SALL4Q9UJQ4 1053 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 PCDHGC4Q9Y5F7 938 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 SHROOM3Q8TF72 1996 aa17.51■□□□□ 0.39
SMG6-214ENST00000573827 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.5■□□□□ 0.39
SMG6-214ENST00000573827 MFAP3LO75121 409 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 H2AFZP0C0S5 128 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 TMEM253P0C7T8 217 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 TSHRP16473 764 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 MAN1A1P33908 653 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 TRIM23P36406 574 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 MAXP61244 160 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 TBX2Q13207 712 aaPredicted RBP17.5■□□□□ 0.39
SMG6-214ENST00000573827 MTM1Q13496 603 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 C1orf61Q13536 156 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 TRIM14Q14142 442 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 ZNF235Q14590 738 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 PRRT3Q5FWE3 981 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 ALG1LQ6GMV1 187 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 H2AFVQ71UI9 128 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 SLC35F3Q8IY50 421 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 BTN2A2Q8WVV5 523 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 FATE1Q969F0 183 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 MCCC1Q96RQ3 725 aaPredicted RBP17.5■□□□□ 0.39
SMG6-214ENST00000573827 ZNF670Q9BS34 389 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 NRSN2Q9GZP1 204 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 ABHD10Q9NUJ1 306 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 CTTNBP2NLQ9P2B4 639 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 SPASTQ9UBP0 616 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 CLCA2Q9UQC9 943 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 OR1A2Q9Y585 309 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 AHCTF1Q8WYP5 2266 aa17.5■□□□□ 0.39
SMG6-214ENST00000573827 ADAMTS20P59510 1910 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 EME2A4GXA9 379 aaPredicted RBP17.49■□□□□ 0.39
SMG6-214ENST00000573827 CASC3O15234 703 aaKnown RBP17.49■□□□□ 0.39
SMG6-214ENST00000573827 YY2O15391 372 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 CBFA2T2O43439 604 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 FZD6O60353 706 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 MTA2O94776 668 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 MT-CO3P00414 261 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 TPM3P06753 285 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 LHCGRP22888 699 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 SERPINB6P35237 376 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 GARSP41250 739 aaKnown RBP17.49■□□□□ 0.39
SMG6-214ENST00000573827 MMP13P45452 471 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 HK3P52790 923 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 POLR2LP62875 67 aaKnown RBP17.49■□□□□ 0.39
SMG6-214ENST00000573827 PPARDQ03181 441 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 SLC10A2Q12908 348 aaPredicted RBP17.49■□□□□ 0.39
SMG6-214ENST00000573827 KRT81Q14533 505 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 PTPRRQ15256 657 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 CNGA3Q16281 694 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 ANKRD20A8PQ5CZ79 823 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 RALGPS1Q5JS13 557 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 CFAP58Q5T655 872 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 GUSBP11Q6P575 273 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 LRRC49Q8IUZ0 686 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 RAPGEF5Q92565 580 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 TSACCQ96A04 125 aaPredicted RBP17.49■□□□□ 0.39
SMG6-214ENST00000573827 TSPY26PQ9H489 355 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 PPIL1Q9Y3C6 166 aa17.49■□□□□ 0.39
SMG6-214ENST00000573827 ATMQ13315 3056 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 A0A087WV48 116 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 TMEM202A6NGA9 273 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 TMEM110-MUSTN1A8MSY1 372 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 TLX3O43711 291 aaPredicted RBP17.48■□□□□ 0.39
SMG6-214ENST00000573827 HEXIM1O94992 359 aaKnown RBP17.48■□□□□ 0.39
SMG6-214ENST00000573827 PGLSO95336 258 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 PCCBP05166 539 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 HOXC4P09017 264 aaPredicted RBP17.48■□□□□ 0.39
SMG6-214ENST00000573827 ADKP55263 362 aaKnown RBP17.48■□□□□ 0.39
SMG6-214ENST00000573827 KIAA1024LP59773 190 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 GBE1Q04446 702 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 PDK2Q15119 407 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 HADHQ16836 314 aaKnown RBP17.48■□□□□ 0.39
SMG6-214ENST00000573827 C6orf132Q5T0Z8 1188 aa17.48■□□□□ 0.39
SMG6-214ENST00000573827 MARC1Q5VT66 337 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms