RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 HACD2Q6Y1H2 254 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 ERI1Q8IV48 349 aaKnown RBP15.71■□□□□ 0.11
NUP88-207ENST00000573584 LZTR1Q8N653 840 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 CALML6Q8TD86 181 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 TSPAN17Q96FV3 270 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 UBXN10Q96LJ8 280 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 ANKRD60Q9BZ19 345 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 GSTO2Q9H4Y5 243 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 CATSPERBQ9H7T0 1116 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 LIN28AQ9H9Z2 209 aaKnown RBP15.71■□□□□ 0.11
NUP88-207ENST00000573584 HACD3Q9P035 362 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 GMPR2Q9P2T1 348 aaKnown RBP15.71■□□□□ 0.11
NUP88-207ENST00000573584 SQORQ9Y6N5 450 aa15.71■□□□□ 0.11
NUP88-207ENST00000573584 SOCS2O14508 198 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 IMPDH1P20839 514 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 LEPRP48357 1165 aaKnown RBP15.71■□□□□ 0.1
NUP88-207ENST00000573584 CLCN5P51795 746 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 NDST2P52849 883 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 CRYBB1P53674 252 aaPredicted RBP15.71■□□□□ 0.1
NUP88-207ENST00000573584 WNT3AP56704 352 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 STX1BP61266 288 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 PRAMEP78395 509 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 MFSD10Q14728 455 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 PPP4R4Q6NUP7 873 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 CYHR1Q6ZMK1 362 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 FUNDC1Q8IVP5 155 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 ANKFN1Q8N957 763 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 OR2T34Q8NGX1 318 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 OR2T3Q8NH03 318 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 GTF3C2Q8WUA4 911 aaPredicted RBP15.71■□□□□ 0.1
NUP88-207ENST00000573584 ALG9Q9H6U8 611 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 CLK4Q9HAZ1 481 aaKnown RBP15.71■□□□□ 0.1
NUP88-207ENST00000573584 CSNK1G1Q9HCP0 422 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 DUS2Q9NX74 493 aaKnown RBP15.71■□□□□ 0.1
NUP88-207ENST00000573584 VWA7Q9Y334 891 aa15.71■□□□□ 0.1
NUP88-207ENST00000573584 MTF2Q9Y483 593 aaPredicted RBP15.71■□□□□ 0.1
NUP88-207ENST00000573584 PAGE1O75459 146 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 BMP2P12643 396 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 BDNFP23560 247 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 ACADVLP49748 655 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 HECTD2Q5U5R9 776 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 FAM47BQ8NA70 645 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 PCYOX1LQ8NBM8 494 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 MYLPFQ96A32 169 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 SLC38A7Q9NVC3 462 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 KCNC1P48547 511 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 CDH15P55291 814 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 TUBA4AP68366 448 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 ADAM17P78536 824 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 C3orf58Q8NDZ4 430 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 GABPB2Q8TAK5 448 aaPredicted RBP15.7■□□□□ 0.1
NUP88-207ENST00000573584 FAM110BQ8TC76 370 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 C19orf60Q96EN9 201 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 FCRL2Q96LA5 508 aaPredicted RBP15.7■□□□□ 0.1
NUP88-207ENST00000573584 C3orf30Q96M34 536 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 PHF12Q96QT6 1004 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 GAD1Q99259 594 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 TRMOQ9BU70 441 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 IL1RL2Q9HB29 575 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 ARMC1Q9NVT9 282 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 CIDEBQ9UHD4 219 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 SLC8A2Q9UPR5 921 aa15.7■□□□□ 0.1
NUP88-207ENST00000573584 FAM155AB1AL88 458 aaPredicted RBP15.69■□□□□ 0.1
NUP88-207ENST00000573584 FGF10O15520 208 aaPredicted RBP15.69■□□□□ 0.1
NUP88-207ENST00000573584 NME5P56597 212 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 MYBPC3Q14896 1274 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 KIF19Q2TAC6 998 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 TIGD7Q6NT04 549 aaPredicted RBP15.69■□□□□ 0.1
NUP88-207ENST00000573584 RETREG3Q86VR2 466 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 FIBCD1Q8N539 461 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 HM13Q8TCT9 377 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 TFAP2CQ92754 450 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 ROPN1LQ96C74 230 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 TCF12Q99081 682 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 SPON1Q9HCB6 807 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 TBC1D13Q9NVG8 400 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 AURKCQ9UQB9 309 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 A0A0J9YVX5 310 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 SAC3D1A6NKF1 404 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 PDHXO00330 501 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 ALDOCP09972 364 aaKnown RBP15.69■□□□□ 0.1
NUP88-207ENST00000573584 ATP6V1B2P21281 511 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 PCSK1P29120 753 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 ADARP55265 1226 aaKnown RBP15.69■□□□□ 0.1
NUP88-207ENST00000573584 PLOD1Q02809 727 aaPredicted RBP15.69■□□□□ 0.1
NUP88-207ENST00000573584 ZNF678Q5SXM1 525 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 GPR158Q5T848 1215 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 ERMP1Q7Z2K6 904 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 GPR142Q7Z601 462 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 LDB1Q86U70 411 aaPredicted RBP15.69■□□□□ 0.1
NUP88-207ENST00000573584 SCAMP5Q8TAC9 235 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 LRCH3Q96II8 777 aa15.69■□□□□ 0.1
NUP88-207ENST00000573584 IGLV3-25P01717 112 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 THP07101 528 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 GPX3P22352 226 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 RPL10P27635 214 aaKnown RBP15.68■□□□□ 0.1
NUP88-207ENST00000573584 EMP3P54852 163 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 CDH13P55290 713 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 SLC14A2Q15849 920 aa15.68■□□□□ 0.1
NUP88-207ENST00000573584 PRAMEF19Q5SWL8 479 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms