RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TTMPQ5BVD1 217 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 RNASEH2BQ5TBB1 312 aaKnown RBP10.16□□□□□ -0.78
SMG6-213ENST00000573166 KLHDC10Q6PID8 442 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 ARHGAP36Q6ZRI8 547 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 SYTL1Q8IYJ3 562 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 ITFG1Q8TB96 612 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 ELMO1Q92556 727 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 MFSD3Q96ES6 412 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 RNF38Q9H0F5 515 aa10.16□□□□□ -0.78
SMG6-213ENST00000573166 TCRBV9S1A1TA0A576 114 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 KDELR3O43731 214 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 PRAMEF11O60813 436 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 ALADP13716 330 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 MDH1P40925 334 aaKnown RBP10.15□□□□□ -0.78
SMG6-213ENST00000573166 UMODL1-AS1Q8N2C9 162 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 MCOLN3Q8TDD5 553 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 CCT8L2Q96SF2 557 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 NDNQ99608 321 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 SHCBP1LQ9BZQ2 653 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 NOD2Q9HC29 1040 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 CACNA2D2Q9NY47 1150 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 GLYATL1P3A0A0U1RQE8 302 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 CDK14O94921 469 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 KAT7O95251 611 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 LATS1O95835 1130 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 PRKCGP05129 697 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 PTGIRP43119 386 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 GSCP56915 257 aaPredicted RBP10.15□□□□□ -0.78
SMG6-213ENST00000573166 IL2P60568 153 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 ILF2Q12905 390 aaKnown RBP10.15□□□□□ -0.78
SMG6-213ENST00000573166 NAB1Q13506 487 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 CAMK2GQ13555 558 aaPredicted RBP10.15□□□□□ -0.78
SMG6-213ENST00000573166 TSNAXIP1Q2TAA8 658 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 C22orf39Q6P5X5 142 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 GDPD4Q6W3E5 623 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 PGAP3Q96FM1 320 aaPredicted RBP10.15□□□□□ -0.78
SMG6-213ENST00000573166 RXFP1Q9HBX9 757 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 TMBIM4Q9HC24 238 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 CD248Q9HCU0 757 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 PHPT1Q9NRX4 125 aaPredicted RBP10.15□□□□□ -0.78
SMG6-213ENST00000573166 TDRKHQ9Y2W6 561 aaKnown RBP10.15□□□□□ -0.78
SMG6-213ENST00000573166 GPSM3Q9Y4H4 160 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 CCDC160A6NGH7 325 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 AGPSO00116 658 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 BTN3A1O00481 513 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 PPFIA2O75334 1257 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 FSBPO95073 299 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 PFKLP17858 780 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 STK19P49842 368 aaPredicted RBP10.15□□□□□ -0.78
SMG6-213ENST00000573166 ZNF844Q08AG5 666 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 TBCCQ15814 346 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 TMTC4Q5T4D3 741 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 GAREM2Q75VX8 874 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 NLRP14Q86W24 1093 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 STYXQ8WUJ0 223 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 CCDC126Q96EE4 140 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 PHF21BQ96EK2 531 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 ACSS3Q9H6R3 686 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 IL1RAPL1Q9NZN1 696 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 CD84Q9UIB8 345 aa10.15□□□□□ -0.78
SMG6-213ENST00000573166 EDDM13A0A1B0GTR0 161 aa10.15□□□□□ -0.79
SMG6-213ENST00000573166 TULP3O75386 442 aa10.15□□□□□ -0.79
SMG6-213ENST00000573166 RPP40O75818 363 aaKnown RBP10.15□□□□□ -0.79
SMG6-213ENST00000573166 CPA3P15088 417 aa10.15□□□□□ -0.79
SMG6-213ENST00000573166 FAM109BQ6ICB4 259 aaPredicted RBP10.15□□□□□ -0.79
SMG6-213ENST00000573166 SZRD1Q7Z422 152 aa10.15□□□□□ -0.79
SMG6-213ENST00000573166 PRPF39Q86UA1 669 aaKnown RBP10.15□□□□□ -0.79
SMG6-213ENST00000573166 RBFAQ8N0V3 343 aa10.15□□□□□ -0.79
SMG6-213ENST00000573166 KLK6Q92876 244 aa10.15□□□□□ -0.79
SMG6-213ENST00000573166 HLA-CQ95604 372 aa10.15□□□□□ -0.79
SMG6-213ENST00000573166 DNAJC1Q96KC8 554 aaKnown RBP10.15□□□□□ -0.79
SMG6-213ENST00000573166 SLCO3A1Q9UIG8 710 aa10.15□□□□□ -0.79
SMG6-213ENST00000573166 GNPTGQ9UJJ9 305 aa10.15□□□□□ -0.79
SMG6-213ENST00000573166 MPOP05164 745 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 TPBGLP0DKB5 382 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 CYP2A7P20853 494 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 SLC8A1P32418 973 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 SPAM1P38567 509 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 SEMA5AQ13591 1074 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 OASLQ15646 514 aaKnown RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 MYLK3Q32MK0 819 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 N4BP2L1Q5TBK1 243 aaPredicted RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 GPR65Q8IYL9 337 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 KIRREL3Q8IZU9 778 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 SCML4Q8N228 414 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 BRSK1Q8TDC3 778 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 SORCS1Q8WY21 1168 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 CENPIQ92674 756 aaPredicted RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 SERAC1Q96JX3 654 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 CRISPLD1Q9H336 500 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 PHTF1Q9UMS5 762 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 TRIM33Q9UPN9 1127 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 ZNF487B1APH4 448 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 ZBTB14O43829 449 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 PIGNO95427 931 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 PRAMEF1O95521 474 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 CATP04040 527 aaKnown RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 KELP23276 732 aa10.14□□□□□ -0.79
SMG6-213ENST00000573166 HNRNPH1P31943 449 aaKnown RBP10.14□□□□□ -0.79
SMG6-213ENST00000573166 CLCN5P51795 746 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms