RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MR1Q95460 341 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SLC22A18Q96BI1 424 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PTERQ96BW5 349 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SAAL1Q96ER3 474 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ALG14Q96F25 216 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 C14orf79Q96F83 325 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 TPD52L3Q96J77 140 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ZBTB45Q96K62 511 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 FAM71F1Q96KD3 344 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 CAMK1GQ96NX5 476 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PANX2Q96RD6 677 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 TWNKQ96RR1 684 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SECISBP2Q96T21 854 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 GPR20Q99678 358 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 NTMT1Q9BV86 223 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 EIF2AQ9BY44 585 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 HAPLN2Q9GZV7 340 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 FAM107BQ9H098 131 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 GANQ9H2C0 597 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 MUC13Q9H3R2 512 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 RNPEPQ9H4A4 650 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 TFB2MQ9H5Q4 396 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 LRRC40Q9H9A6 602 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 LIN7BQ9HAP6 207 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SCPEP1Q9HB40 452 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 FBRSL1Q9HCM7 1045 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 LZTFL1Q9NQ48 299 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CYP26B1Q9NR63 512 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CENPMQ9NSP4 180 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 ABCB8Q9NUT2 735 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 DMAC2Q9NW81 257 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 HCFC1R1Q9NWW0 138 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 DNAJC28Q9NX36 388 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 SOHLH2Q9NX45 425 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 NDUFAF4Q9P032 175 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 MARCH4Q9P2E8 410 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 MYO1AQ9UBC5 1043 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 DNAI1Q9UI46 699 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 CNOT11Q9UKZ1 510 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 CAPN11Q9UMQ6 739 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 GAB2Q9UQC2 676 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 RUVBL1Q9Y265 456 aaKnown RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 RPH3AQ9Y2J0 694 aaPredicted RBP3.6□□□□□ -1.83
SMG6-208ENST00000570874 TIMM22Q9Y584 194 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PCDHB2Q9Y5E7 798 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PCDHA11Q9Y5I1 949 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.6□□□□□ -1.83
SMG6-208ENST00000570874 DMRT1Q9Y5R6 373 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 GPR45Q9Y5Y3 372 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 FHOD1Q9Y613 1164 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PSAT1Q9Y617 370 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 PIAS3Q9Y6X2 628 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 UBE4BO95155 1302 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 GBF1Q92538 1859 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 DENND4CQ5VZ89 1909 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 NUP205Q92621 2012 aa3.6□□□□□ -1.83
SMG6-208ENST00000570874 MYO18AQ92614 2054 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 OBSL1O75147 1896 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 SERTM2A0A1B0GWG4 89 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ARHGEF37A1IGU5 675 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 TTC24A2A3L6 582 aaPredicted RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 BLACEA4D250 179 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 TMEM221A6NGB7 291 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 HMX3A6NHT5 357 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 OR5K4A6NMS3 321 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 A8MV72 311 aaPredicted RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 KPNA7A9QM74 516 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 E9PI62 339 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 DNM1LO00429 736 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 C2CD2LO14523 706 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 HAT1O14929 419 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 PHGDHO43175 533 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 HNRNPRO43390 633 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 GPRIN2O60269 458 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ATP6V1G1O75348 118 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 PAGE1O75459 146 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ATP5HO75947 161 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CCNDBP1O95273 360 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 TNFRSF6BO95407 300 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 GNA14O95837 355 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 CALCAP01258 141 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 IL1AP01583 271 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 HLA-DRAP01903 254 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 URODP06132 367 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 FESP07332 822 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 RETP07949 1114 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ALOX5P09917 674 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 WEE2P0C1S8 567 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ZNF286BP0CG31 522 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 MAPTP10636 758 aaKnown RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 RALBP11234 206 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 UBL4AP11441 157 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 HOXD8P13378 290 aaPredicted RBP3.59□□□□□ -1.83
SMG6-208ENST00000570874 ALADP13716 330 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 EDN3P14138 238 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 JUPP14923 745 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 SMPD1P17405 629 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 PON1P27169 355 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 HOXC8P31273 242 aa3.59□□□□□ -1.83
SMG6-208ENST00000570874 ARL2P36404 184 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms