RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 MAML3Q96JK9 1138 aa16.97■□□□□ 0.31
PCDHB19P-201ENST00000570871 SIK2Q9H0K1 926 aa16.97■□□□□ 0.31
PCDHB19P-201ENST00000570871 SLC8A2Q9UPR5 921 aa16.97■□□□□ 0.31
PCDHB19P-201ENST00000570871 TRAF6Q9Y4K3 522 aa16.97■□□□□ 0.31
PCDHB19P-201ENST00000570871 TIMM13Q9Y5L4 95 aaPredicted RBP16.97■□□□□ 0.31
PCDHB19P-201ENST00000570871 SAC3D1A6NKF1 404 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 SNAI1O95863 264 aaPredicted RBP16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 GNAO1P09471 354 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 LTA4HP09960 611 aaKnown RBP16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 BMP2P12643 396 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 PAMP19021 973 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 ZNF157P51786 506 aaPredicted RBP16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 ZNF135P52742 658 aaPredicted RBP16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 AGAP9Q5VTM2 703 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 KIAA0930Q6ICG6 404 aaPredicted RBP16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 FUNDC1Q8IVP5 155 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 SHCBP1Q8NEM2 672 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 OR2T34Q8NGX1 318 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 OR2T3Q8NH03 318 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 ABTB1Q969K4 478 aaPredicted RBP16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 LRCH3Q96II8 777 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 ZIC5Q96T25 663 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 IL12RB2Q99665 862 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 RHOBTB2Q9BYZ6 727 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 GSTO2Q9H4Y5 243 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 SFMBT1Q9UHJ3 866 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 NEU3Q9UQ49 428 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 IPPQ9Y573 584 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 RRN3P2A6NIE6 340 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 HHLA1C9JL84 531 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 MAGEB3O15480 346 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 BMP10O95393 424 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 GEMP55040 296 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 ZNF33AQ06730 810 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 NOMO2Q5JPE7 1267 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 KLHL35Q6PF15 583 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 HACD2Q6Y1H2 254 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 LARP4Q71RC2 724 aaKnown RBP eCLIP16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 ERMP1Q7Z2K6 904 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 SAPCD2Q86UD0 394 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 RETREG3Q86VR2 466 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 SMG8Q8ND04 991 aaKnown RBP16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 PTCD2Q8WV60 388 aaKnown RBP16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 ZFP42Q96MM3 310 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 FSD1LQ9BXM9 530 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 UPF3AQ9H1J1 476 aaKnown RBP16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 MRM3Q9HC36 420 aaKnown RBP16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 ARMC1Q9NVT9 282 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 RRN3Q9NYV6 651 aa16.96■□□□□ 0.31
PCDHB19P-201ENST00000570871 PTGESO14684 152 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 MAFKO60675 156 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 HSPA8P11142 646 aaKnown RBP16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 HOXD8P13378 290 aaPredicted RBP16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 AXLP30530 894 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 STT3AP46977 705 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 PLOD1Q02809 727 aaPredicted RBP16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 SNX17Q15036 470 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 RASAL3Q86YV0 1011 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 CCDC117Q8IWD4 279 aaPredicted RBP16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 OR6J1Q8NGC5 347 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 ANKRD49Q8WVL7 239 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 DNAJB3Q8WWF6 145 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 HSPBAP1Q96EW2 488 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 SENP8Q96LD8 212 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 C3orf30Q96M34 536 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 FAM210AQ96ND0 272 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 BIRC8Q96P09 236 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 TCF12Q99081 682 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 ENTPD7Q9NQZ7 604 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 SMOXQ9NWM0 555 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 ZFC3H1O60293 1989 aaKnown RBP16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 DLGAP1O14490 977 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 STAMBPO95630 424 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 HLA-DQB2P05538 268 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 ALDOCP09972 364 aaKnown RBP16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 UGT1A6P19224 532 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 CDC42EP1Q00587 391 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 PCBP1Q15365 356 aaKnown RBP eCLIP16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 MAP7D1Q3KQU3 841 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 CBR4Q8N4T8 237 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 MRGPRX2Q96LB1 330 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 IL1RL2Q9HB29 575 aa16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 CHCHD3Q9NX63 227 aaKnown RBP16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 MTF2Q9Y483 593 aaPredicted RBP16.95■□□□□ 0.3
PCDHB19P-201ENST00000570871 NME4O00746 187 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 MATN3O15232 486 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 RBP1P09455 135 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 SMIM10L2AP0DMW4 78 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 SMIM10L2BP0DMW5 78 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 KCNC1P48547 511 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 RANBP10Q6VN20 620 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 CLVS1Q8IUQ0 354 aaPredicted RBP16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 SLC39A8Q9C0K1 460 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 HACD3Q9P035 362 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 EBF1Q9UH73 591 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 AURKCQ9UQB9 309 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 SMIM35A0A1B0GVV1 85 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 FAM149AA5PLN7 773 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 GPX3P22352 226 aa16.94■□□□□ 0.3
PCDHB19P-201ENST00000570871 ACADVLP49748 655 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms