RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 DDX58O95786 925 aaKnown RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 CRYABP02511 175 aaKnown RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 LYL1P12980 280 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 PRPH2P23942 346 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 SERPINA4P29622 427 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 PPP2R1AP30153 589 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 NF2P35240 595 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 PRKAA2P54646 552 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 FOXG1P55316 489 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 POLE2P56282 527 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 FKBP1BP68106 108 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 RHAGQ02094 409 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 CDK18Q07002 472 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 PDCLQ13371 301 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 MANEAQ5SRI9 462 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 C10orf76Q5T2E6 689 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 ITPRIPL1Q6GPH6 555 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 ISM2Q6H9L7 571 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 HMBOX1Q6NT76 420 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 DSTYKQ6XUX3 929 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 C4orf50Q6ZRC1 276 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 FAM43BQ6ZT52 329 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 CYB5R4Q7L1T6 521 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 ARMC9Q7Z3E5 817 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 GALNT5Q7Z7M9 940 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 PIM3Q86V86 326 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 TMEM200AQ86VY9 491 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 FTSJ3Q8IY81 847 aaKnown RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 TMEM217Q8N7C4 229 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 AGBL3Q8NEM8 1001 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 SLC2A12Q8TD20 617 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 CSGALNACT1Q8TDX6 532 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 CENPIQ92674 756 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 HTRA1Q92743 480 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 ERO1AQ96HE7 468 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 RSRC1Q96IZ7 334 aaKnown RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 ZNF333Q96JL9 665 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 MAELQ96JY0 434 aaKnown RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 TRAPPC9Q96Q05 1148 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 PYM1Q9BRP8 204 aaKnown RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 FAM234AQ9H0X4 552 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 PRKRIP1Q9H875 184 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 DECR2Q9NUI1 292 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 FEM1BQ9UK73 627 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 NOL7Q9UMY1 257 aaKnown RBP3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 NUDCQ9Y266 331 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 PKP3Q9Y446 797 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 ZNF609O15014 1411 aa3.6□□□□□ -1.83
HMGB1P6-201ENST00000569046 TCRBV7S3A2A0A539 114 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 ANKRD18BA2A2Z9 1011 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 MYMKA6NI61 221 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 NPIPB13A6NJU9 1138 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 NPIPB5A8MRT5 1133 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 NPIPB4C9JG80 1138 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 H0Y3Z8 333 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 KCNAB3O43448 404 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 HTATSF1O43719 755 aaKnown RBP3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 VDRP11473 427 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 HOXB2P14652 356 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 MCCP23508 829 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 ALDH7A1P49419 539 aaKnown RBP3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 RBM5P52756 815 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 POLGP54098 1239 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 DCAF7P61962 342 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 GAD2Q05329 585 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 FHL1Q13642 323 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 GALNT3Q14435 633 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 SEMA3AQ14563 771 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 PRTGQ2VWP7 1150 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 TBRG1Q3YBR2 411 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 SPECC1Q5M775 1068 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 DGAT2L7PQ6IED9 249 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 MTFR2Q6P444 385 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 SLC30A9Q6PML9 568 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 NEK10Q6ZWH5 1172 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 SYT13Q7L8C5 426 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 RNF144BQ7Z419 303 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 HERC6Q8IVU3 1022 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 TTC30BQ8N4P2 665 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 TMEM199Q8N511 208 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 ANKRD52Q8NB46 1076 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 SPPL3Q8TCT6 385 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 TMEM174Q8WUU8 243 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 CPT1BQ92523 772 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 ARRDC3Q96B67 414 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 OPTNQ96CV9 577 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 RRP36Q96EU6 259 aaKnown RBP3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 PRMT6Q96LA8 375 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 NLRP4Q96MN2 994 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 PLEKHF1Q96S99 279 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 WACQ9BTA9 647 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 HERC2P3Q9BVR0 1158 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 DEFB129Q9H1M3 183 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 RSPH9Q9H1X1 276 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 ALDH8A1Q9H2A2 487 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 MAP6D1Q9H9H5 199 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 VEZTQ9HBM0 779 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 SLC22A11Q9NSA0 550 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 ANKEF1Q9NU02 776 aa3.59□□□□□ -1.83
HMGB1P6-201ENST00000569046 ARL15Q9NXU5 204 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms