RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 MSRB2Q9Y3D2 182 aa8.23□□□□□ -1.09
HDGFL3-205ENST00000568129 PCDHB9Q9Y5E1 797 aa8.23□□□□□ -1.09
HDGFL3-205ENST00000568129 PCDHGC4Q9Y5F7 938 aa8.23□□□□□ -1.09
HDGFL3-205ENST00000568129 MAP1BP46821 2468 aaKnown RBP8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 TTC24A2A3L6 582 aaPredicted RBP8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 LRRD1A4D1F6 860 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 NEMP1O14524 444 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 TPP1O14773 563 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 APOL1O14791 398 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 SCAMP1O15126 338 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 ITGAVP06756 1048 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 PDHA1P08559 390 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 ATXN1LP0C7T5 689 aaKnown RBP8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 FTH1P19P0C7X4 201 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 ACP1P24666 158 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 PTPN7P35236 360 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 VAV2P52735 878 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 COPS2P61201 443 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 HNRNPKP61978 463 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 DPTQ07507 201 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 NIPAL4Q0D2K0 466 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 ILKQ13418 452 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 MTM1Q13496 603 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 PTK2BQ14289 1009 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 LRRC14Q15048 493 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 PDK1Q15118 436 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 SMAD1Q15797 465 aaKnown RBP8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 PPP2R5EQ16537 467 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 CDKN3Q16667 212 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 TFDP3Q5H9I0 405 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 LRRC73Q5JTD7 316 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 MACC1Q6ZN28 852 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 TMPRSS7Q7RTY8 843 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 TECPR1Q7Z6L1 1165 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 PARGQ86W56 976 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 GATAD2AQ86YP4 633 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 CCDC13Q8IYE1 715 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 SDR16C5Q8N3Y7 309 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 OR4C6Q8NH72 309 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 EXD1Q8NHP7 514 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 GATA6Q92908 595 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 LGMNQ99538 433 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 BAG1Q99933 345 aaPredicted RBP8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 SEMA3CQ99985 751 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 SCNM1Q9BWG6 230 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 POLR1EQ9GZS1 481 aaKnown RBP8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 NT5MQ9NPB1 228 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 RBM22Q9NW64 420 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 NLGN3Q9NZ94 848 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 PNMA8BQ9ULN7 279 aaPredicted RBP8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 TFR2Q9UP52 801 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 PCDHA3Q9Y5H8 950 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 DGKBQ9Y6T7 804 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 DUSP10Q9Y6W6 482 aa8.22□□□□□ -1.09
HDGFL3-205ENST00000568129 AKAP13Q12802 2813 aa8.21□□□□□ -1.09
HDGFL3-205ENST00000568129 hCG_1818297A0A087WSY0 165 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 LY6G6EA0A0G2JKS1 128 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 A0A0J9YYE9 177 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 TRIM38O00635 465 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 ENC1O14682 589 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 TNFRSF10CO14798 259 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 LZTS3O60299 673 aaPredicted RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 RECQL5O94762 991 aaPredicted RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 HEXIM1O94992 359 aaKnown RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 ZRANB2O95218 330 aaKnown RBP eCLIP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 LDOC1O95751 146 aaPredicted RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 TOP3BO95985 862 aaKnown RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 JCHAINP01591 159 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 TRBC1P01850 177 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 HLA-DQB2P05538 268 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 CKMT1AP12532 417 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 CKMT2P17540 419 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 TGM2P21980 687 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 LHCGRP22888 699 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 XPAP23025 273 aaPredicted RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 NFKBIAP25963 317 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 CTNNA2P26232 953 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 VIPR1P32241 457 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 CTNNA1P35221 906 aaKnown RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 NOP2P46087 812 aaKnown RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 ACADVLP49748 655 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 KIAA1024LP59773 190 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 MAXP61244 160 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 IL9RQ01113 521 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 PTSQ03393 145 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 ADCY2Q08462 1091 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 ZBTB17Q13105 803 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 XRCC4Q13426 336 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 PDE1CQ14123 709 aaPredicted RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 TFDP2Q14188 446 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 PRKD1Q15139 912 aaPredicted RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 IRF4Q15306 451 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 CNGA3Q16281 694 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 TEX44Q53QW1 395 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 ARMC12Q5T9G4 340 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 ESRP1Q6NXG1 681 aaKnown RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 PNCKQ6P2M8 343 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 CCNI2Q6ZMN8 369 aaPredicted RBP8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 SPOCD1Q6ZMY3 1216 aa8.21□□□□□ -1.1
HDGFL3-205ENST00000568129 BZW1Q7L1Q6 419 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms