RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.31■■□□□ 1.64
FANCA-228ENST00000567943 APOL1O14791 398 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 MATN3O15232 486 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 PSTPIP1O43586 416 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 CSF2P04141 144 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 NME1P15531 152 aaKnown RBP25.31■■□□□ 1.64
FANCA-228ENST00000567943 CCNCP24863 283 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 LIG3P49916 1009 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 EIF2B5Q13144 721 aaKnown RBP25.31■■□□□ 1.64
FANCA-228ENST00000567943 ZNF211Q13398 564 aaPredicted RBP25.31■■□□□ 1.64
FANCA-228ENST00000567943 IRF4Q15306 451 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 SMAD1Q15797 465 aaKnown RBP25.31■■□□□ 1.64
FANCA-228ENST00000567943 WSCD2Q2TBF2 565 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 SLC9A4Q6AI14 798 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 RFX6Q8HWS3 928 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 TMEM139Q8IV31 216 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 TEX26Q8N6G2 289 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 TPCN2Q8NHX9 752 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 ZNF830Q96NB3 372 aaPredicted RBP25.31■■□□□ 1.64
FANCA-228ENST00000567943 TSGA13Q96PP4 275 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 NOD2Q9HC29 1040 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 PCDHGC4Q9Y5F7 938 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 PCDHGA1Q9Y5H4 931 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 HEY1Q9Y5J3 304 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 MYLKQ15746 1914 aa25.31■■□□□ 1.64
FANCA-228ENST00000567943 LRP4O75096 1905 aa25.3■■□□□ 1.64
FANCA-228ENST00000567943 GM2AP17900 193 aa25.3■■□□□ 1.64
FANCA-228ENST00000567943 CLDN6P56747 220 aa25.3■■□□□ 1.64
FANCA-228ENST00000567943 C11orf63Q6NUN7 778 aa25.3■■□□□ 1.64
FANCA-228ENST00000567943 MFSD7Q6UXD7 560 aa25.3■■□□□ 1.64
FANCA-228ENST00000567943 PARGQ86W56 976 aa25.3■■□□□ 1.64
FANCA-228ENST00000567943 CCNYQ8ND76 341 aa25.3■■□□□ 1.64
FANCA-228ENST00000567943 OR4C6Q8NH72 309 aa25.3■■□□□ 1.64
FANCA-228ENST00000567943 SPOCK2Q92563 424 aa25.3■■□□□ 1.64
FANCA-228ENST00000567943 MAML1Q92585 1016 aa25.3■■□□□ 1.64
FANCA-228ENST00000567943 DUSP10Q9Y6W6 482 aa25.3■■□□□ 1.64
FANCA-228ENST00000567943 FAM149AA5PLN7 773 aa25.29■■□□□ 1.64
FANCA-228ENST00000567943 FFAR2O15552 330 aa25.29■■□□□ 1.64
FANCA-228ENST00000567943 HTRA2O43464 458 aaPredicted RBP25.29■■□□□ 1.64
FANCA-228ENST00000567943 KRT37O76014 449 aa25.29■■□□□ 1.64
FANCA-228ENST00000567943 POLR2LP62875 67 aaKnown RBP25.29■■□□□ 1.64
FANCA-228ENST00000567943 ITKQ08881 620 aa25.29■■□□□ 1.64
FANCA-228ENST00000567943 AGERQ15109 404 aa25.29■■□□□ 1.64
FANCA-228ENST00000567943 DAAM2Q86T65 1068 aa25.29■■□□□ 1.64
FANCA-228ENST00000567943 PDCD6IPQ8WUM4 868 aaKnown RBP25.29■■□□□ 1.64
FANCA-228ENST00000567943 FATE1Q969F0 183 aa25.29■■□□□ 1.64
FANCA-228ENST00000567943 HDAC11Q96DB2 347 aa25.29■■□□□ 1.64
FANCA-228ENST00000567943 LACRTQ9GZZ8 138 aa25.29■■□□□ 1.64
FANCA-228ENST00000567943 TCEAL2Q9H3H9 227 aaPredicted RBP25.29■■□□□ 1.64
FANCA-228ENST00000567943 RBM22Q9NW64 420 aaKnown RBP eCLIP25.29■■□□□ 1.64
FANCA-228ENST00000567943 GOLGA6L6A8MZA4 724 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 SOCS5O75159 536 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 NEBLO76041 1014 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 ZFXP17010 805 aaPredicted RBP25.28■■□□□ 1.64
FANCA-228ENST00000567943 CKMT2P17540 419 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 VAV2P52735 878 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 NAP1L1P55209 391 aaKnown RBP25.28■■□□□ 1.64
FANCA-228ENST00000567943 HNRNPKP61978 463 aaKnown RBP eCLIP25.28■■□□□ 1.64
FANCA-228ENST00000567943 DYNLT1P63172 113 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 IHHQ14623 411 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 LRRC14Q15048 493 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 RALGPS1Q5JS13 557 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 NPNTQ6UXI9 565 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 NYAP1Q6ZVC0 841 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 KIAA1328Q86T90 577 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 CCDC13Q8IYE1 715 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 ZNF548Q8NEK5 533 aaPredicted RBP25.28■■□□□ 1.64
FANCA-228ENST00000567943 LGMNQ99538 433 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 SEMA3CQ99985 751 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 C1QTNF7Q9BXJ2 289 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 POLR1EQ9GZS1 481 aaKnown RBP25.28■■□□□ 1.64
FANCA-228ENST00000567943 ZMIZ1Q9ULJ6 1067 aa25.28■■□□□ 1.64
FANCA-228ENST00000567943 DSPP15924 2871 aaKnown RBP25.28■■□□□ 1.64
FANCA-228ENST00000567943 ANKRD11Q6UB99 2663 aaPredicted RBP25.27■■□□□ 1.64
FANCA-228ENST00000567943 LY6G6EA0A0G2JKS1 128 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 SCAMP1O15126 338 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 RFPL3O75679 317 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 C1SP09871 688 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 CCNB1P14635 433 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 MARCKSL1P49006 195 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 YPEL5P62699 121 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 TRAF2Q12933 501 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 LLGL1Q15334 1064 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 LIPIQ6XZB0 460 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 RBFAQ8N0V3 343 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.27■■□□□ 1.64
FANCA-228ENST00000567943 TTLL3Q9Y4R7 772 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 U3KQA8 63 aa25.27■■□□□ 1.64
FANCA-228ENST00000567943 CFAP69A5D8W1 941 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 TMEM8BA6NDV4 472 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 BTNL10A8MVZ5 291 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 A8MX80 341 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 MYF5P13349 255 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 KRT10P13645 584 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 JUNDP17535 347 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 ACP1P24666 158 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 CDKN2BP42772 138 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 PPIDQ08752 370 aaKnown RBP25.26■■□□□ 1.63
FANCA-228ENST00000567943 CAMK2BQ13554 666 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 SPOCD1Q6ZMY3 1216 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms