RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	PCDHGC4	Q9Y5F7	938 aa		13.92	□□□□□ -0.18
PKD1-231	ENST00000566784	APC2	O95996	2303 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	TTC24	A2A3L6	582 aa	Predicted RBP	13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	LRRD1	A4D1F6	860 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	FFAR2	O15552	330 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	AQP9	O43315	295 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	LCA5L	O95447	670 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	CP	P00450	1065 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	JUND	P17535	347 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	MX2	P20592	715 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	CES1	P23141	567 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	SLC1A1	P43005	524 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	HADHB	P55084	474 aa	Known RBP	13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	MAX	P61244	160 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	TRAF2	Q12933	501 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	MTM1	Q13496	603 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	HDAC11	Q96DB2	347 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	MRFAP1L1	Q96HT8	127 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	RNF157	Q96PX1	679 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	POLR1E	Q9GZS1	481 aa	Known RBP	13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	CAAP1	Q9H8G2	361 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	NT5M	Q9NPB1	228 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	HAUS2	Q9NVX0	235 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	KCTD5	Q9NXV2	234 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	SPAST	Q9UBP0	616 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	PHTF1	Q9UMS5	762 aa		13.91	□□□□□ -0.18
PKD1-231	ENST00000566784	RP1	P56715	2156 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	DMXL2	Q8TDJ6	3036 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	C3orf70	A6NLC5	250 aa	Predicted RBP	13.9	□□□□□ -0.18
PKD1-231	ENST00000566784		K7ESM1	405 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	TPP1	O14773	563 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	RECQL5	O94762	991 aa	Predicted RBP	13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	PGLS	O95336	258 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	CAPNS1	P04632	268 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	CYP2A6	P11509	494 aa	Predicted RBP	13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	CKMT1A	P12532	417 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	GM2A	P17900	193 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	HNF1B	P35680	557 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	BLK	P51451	505 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	DAB2	P98082	770 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	SEMG2	Q02383	582 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	GBE1	Q04446	702 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	INPP5A	Q14642	412 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	NFATC4	Q14934	902 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	CCDC170	Q8IYT3	715 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	PHACTR4	Q8IZ21	702 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	CACTIN-AS1	Q8N1I8	211 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	ATL2	Q8NHH9	583 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	APOLD1	Q96LR9	279 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	ZNF830	Q96NB3	372 aa	Predicted RBP	13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	SEMA3C	Q99985	751 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	APOO	Q9BUR5	198 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	SLC13A1	Q9BZW2	595 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	EVA1B	Q9NVM1	165 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	DTL	Q9NZJ0	730 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	B4GALT6	Q9UBX8	382 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	APOBEC3B	Q9UH17	382 aa	Known RBP	13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	ZMIZ1	Q9ULJ6	1067 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	PPIL1	Q9Y3C6	166 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	PKD1L2	Q7Z442	2459 aa		13.9	□□□□□ -0.18
PKD1-231	ENST00000566784	FREM2	Q5SZK8	3169 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	PSMD11	O00231	422 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	NEBL	O76041	1014 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	HEXIM1	O94992	359 aa	Known RBP	13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	MAP3K6	O95382	1288 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	HOXC4	P09017	264 aa	Predicted RBP	13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	CCNB1	P14635	433 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	HTR1B	P28222	390 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	VIPR1	P32241	457 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	MAGEA1	P43355	309 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	DUSP3	P51452	185 aa	Predicted RBP	13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	ZNF75D	P51815	510 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	E2F1	Q01094	437 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	PPARD	Q03181	441 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	PPID	Q08752	370 aa	Known RBP	13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	SLC10A2	Q12908	348 aa	Predicted RBP	13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	CAMK2B	Q13554	666 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	CNGA3	Q16281	694 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	ARMC12	Q5T9G4	340 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	SLC9A4	Q6AI14	798 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	ESRP1	Q6NXG1	681 aa	Known RBP	13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	RHOT1	Q8IXI2	618 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	RBFA	Q8N0V3	343 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	PLD5	Q8N7P1	536 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	LMX1A	Q8TE12	382 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	SCRN2	Q96FV2	425 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	COQ10A	Q96MF6	247 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	LRRC61	Q9BV99	259 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	RBSN	Q9H1K0	784 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	DDX56	Q9NY93	547 aa	Known RBP	13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	NCKIPSD	Q9NZQ3	722 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	DKK4	Q9UBT3	224 aa		13.89	□□□□□ -0.19
PKD1-231	ENST00000566784	SALL4	Q9UJQ4	1053 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms