RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 GMFBP60983 142 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 HTD2P86397 168 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 ECT2LQ008S8 904 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 NHLH2Q02577 135 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CCDC15Q0P6D6 951 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 DLG2Q15700 870 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 GEN1Q17RS7 908 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 MYLK3Q32MK0 819 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CXorf66Q5JRM2 361 aaPredicted RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 TMEM198Q66K66 360 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 LRRC8EQ6NSJ5 796 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 ZCCHC12Q6PEW1 402 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC39A5Q6ZMH5 540 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CFAP77Q6ZQR2 320 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 MARK2Q7KZI7 788 aaKnown RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 ADCK1Q86TW2 530 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 TMEM200AQ86VY9 491 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 DZIP1Q86YF9 867 aaKnown RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 SYT12Q8IV01 421 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 MFN1Q8IWA4 741 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CNTN4Q8IWV2 1026 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 SCYL3Q8IZE3 742 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 HDDC3Q8N4P3 179 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 LINC00482Q8N8I6 264 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 RTL3Q8N8U3 475 aaKnown RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 SCAIQ8N9R8 606 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 RASSF8Q8NHQ8 419 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 FBXO30Q8TB52 745 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CCDC110Q8TBZ0 833 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 ZNF606Q8WXB4 792 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 TEKT1Q969V4 418 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 RNF31Q96EP0 1072 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CEP295NLQ96MC4 621 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 ZNF830Q96NB3 372 aaPredicted RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 GPR78Q96P69 363 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM111AQ96PZ2 611 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CTAGE1Q96RT6 745 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CDK5RAP1Q96SZ6 601 aaKnown RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 SH3GL2Q99962 352 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 DPYSL5Q9BPU6 564 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 MLPHQ9BV36 600 aaPredicted RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CINPQ9BW66 212 aaPredicted RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 CADM1Q9BY67 442 aaKnown RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.4□□□□□ -1.872e-6■■■■□ 23.5
HERPUD1-211ENST00000566550 WDR26Q9H7D7 661 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 AGO3Q9H9G7 860 aaKnown RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 MRPL44Q9H9J2 332 aaKnown RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 ASAH2Q9NR71 780 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 TAS2R3Q9NYW6 316 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM96BQ9Y3D0 163 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 SPAG9O60271 1321 aaKnown RBP3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 ACEP12821 1306 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 AOX1Q06278 1338 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 SYNRGQ9UMZ2 1314 aa3.4□□□□□ -1.87
HERPUD1-211ENST00000566550 PRAMEF33A0A0G2JMD5 474 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 HTR3EA5X5Y0 456 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 MYADML2A6NDP7 307 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ANXA2P2A6NMY6 339 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 KDM4EB2RXH2 506 aaPredicted RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 E7ENX8 843 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM86B1E9PN63 330 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 LEFTY2O00292 366 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 DSCR3O14972 297 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 EIF3DO15371 548 aaKnown RBP eCLIP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 RIPK2O43353 540 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC25A17O43808 307 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 NOBOXO60393 691 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 CDC14BO60729 498 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 PRAMEF10O60809 474 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 PRAMEF2O60811 474 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 GPC4O75487 556 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ZFPL1O95159 310 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 SNX4O95219 450 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 SLPIP03973 132 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 PLA2G1BP04054 148 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ALPPP05187 535 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM86B2P0C5J1 330 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM58BPP0C7Q3 252 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ALPPL2P10696 532 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 UROSP10746 265 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ZFXP17010 805 aaPredicted RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 GJA1P17302 382 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ANXA7P20073 488 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 CASTP20810 708 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 MATN1P21941 496 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 CDAP32320 146 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 CTNNB1P35222 781 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ACVRL1P37023 503 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 CASP3P42574 277 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 IFNAR2P48551 515 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 JAK3P52333 1124 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 PDE1AP54750 535 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 ARSFP54793 590 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 CDH13P55290 713 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 STARD6P59095 220 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 STX1BP61266 288 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 SUMO2P61956 95 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 RPS7P62081 194 aaKnown RBP3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 TAP2Q03519 686 aa3.39□□□□□ -1.87
HERPUD1-211ENST00000566550 OCA2Q04671 838 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms