RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 AMPD1P23109 780 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 SERPINB6P35237 376 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 SLC10A7Q0GE19 358 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 RALGDSQ12967 914 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 TBC1D25Q3MII6 688 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 ESRP1Q6NXG1 681 aaKnown RBP20.28■□□□□ 0.84
CLN6-207ENST00000566347 LVRNQ6Q4G3 990 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 ENPP7Q6UWV6 458 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 DPPA4Q7L190 304 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 HID1Q8IV36 788 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 TP53INP2Q8IXH6 220 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 SLC35F3Q8IY50 421 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 LSMEM2Q8N112 164 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 SPOCK2Q92563 424 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 GRAMD1AQ96CP6 724 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 NUP85Q9BW27 656 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 CLPBQ9H078 707 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 KLQ9UEF7 1012 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 ANAPC7Q9UJX3 599 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 ATRXP46100 2492 aa20.28■□□□□ 0.84
CLN6-207ENST00000566347 SOCS5O75159 536 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 USP12O75317 370 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 RECQL5O94762 991 aaPredicted RBP20.27■□□□□ 0.84
CLN6-207ENST00000566347 CYP1A2P05177 515 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 TGM2P21980 687 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 NFKBIAP25963 317 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 SRP54P61011 504 aaKnown RBP20.27■□□□□ 0.84
CLN6-207ENST00000566347 NFKBIBQ15653 356 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 ALG11Q2TAA5 492 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 LIPIQ6XZB0 460 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 ATPAF2Q8N5M1 289 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 WDR48Q8TAF3 677 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 NSMCE1Q8WV22 266 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 CPLX3Q8WVH0 158 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 TSACCQ96A04 125 aaPredicted RBP20.27■□□□□ 0.84
CLN6-207ENST00000566347 WDR92Q96MX6 357 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 ETNK2Q9NVF9 386 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 RCOR3Q9P2K3 495 aaPredicted RBP20.27■□□□□ 0.84
CLN6-207ENST00000566347 OR1A2Q9Y585 309 aa20.27■□□□□ 0.84
CLN6-207ENST00000566347 A0A087X0T9 212 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 MYO1FO00160 1098 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 CACNB4O00305 520 aaPredicted RBP20.26■□□□□ 0.83
CLN6-207ENST00000566347 TCEA3O75764 348 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 PEX11BO96011 259 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 FAM228BP0C875 321 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 PTMSP20962 102 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 CDH6P55285 790 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 SLC25A11Q02978 314 aaKnown RBP20.26■□□□□ 0.83
CLN6-207ENST00000566347 KRT81Q14533 505 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 RALGPS1Q5JS13 557 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 ALKBH5Q6P6C2 394 aaKnown RBP20.26■□□□□ 0.83
CLN6-207ENST00000566347 GKN2Q86XP6 184 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 ARL10Q8N8L6 244 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 BTBD6Q96KE9 485 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 ZNF578Q96N58 590 aaPredicted RBP20.26■□□□□ 0.83
CLN6-207ENST00000566347 NUDCD1Q96RS6 583 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 MGME1Q9BQP7 344 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 PCDH18Q9HCL0 1135 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 PADI4Q9UM07 663 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 DGKBQ9Y6T7 804 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 RP1P56715 2156 aa20.26■□□□□ 0.83
CLN6-207ENST00000566347 LRP4O75096 1905 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 HTRA2O43464 458 aaPredicted RBP20.25■□□□□ 0.83
CLN6-207ENST00000566347 MAFKO60675 156 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 DXOO77932 396 aaKnown RBP20.25■□□□□ 0.83
CLN6-207ENST00000566347 TNFP01375 233 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 TPM3P06753 285 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 HOXC4P09017 264 aaPredicted RBP20.25■□□□□ 0.83
CLN6-207ENST00000566347 KELP23276 732 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 LSSP48449 732 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 KIAA1024LP59773 190 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 GABREP78334 506 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 HADHQ16836 314 aaKnown RBP20.25■□□□□ 0.83
CLN6-207ENST00000566347 ISXQ2M1V0 245 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 CCDC122Q5T0U0 273 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 TXNRD3NBQ6F5E7 133 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 RBM44Q6ZP01 1051 aaKnown RBP20.25■□□□□ 0.83
CLN6-207ENST00000566347 RD3Q7Z3Z2 195 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 LRRC49Q8IUZ0 686 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 PLA2G15Q8NCC3 412 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 POLR1BQ9H9Y6 1135 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 KCTD5Q9NXV2 234 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 IFNKQ9P0W0 207 aa20.25■□□□□ 0.83
CLN6-207ENST00000566347 LOC400499M0QZD8 3231 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 GYPCP04921 128 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 MPOP05164 745 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 CELA2BP08218 269 aaPredicted RBP20.24■□□□□ 0.83
CLN6-207ENST00000566347 HOXB3P14651 431 aaPredicted RBP20.24■□□□□ 0.83
CLN6-207ENST00000566347 CR2P20023 1033 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 ITPKBP27987 946 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 ACOX1Q15067 660 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 PERM1Q5SV97 790 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 MARC1Q5VT66 337 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 OR56A4Q8NGH8 313 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 PCDH19Q8TAB3 1148 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 NSMCE3Q96MG7 304 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 NOD2Q9HC29 1040 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 B4GALT6Q9UBX8 382 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 PCDHGC4Q9Y5F7 938 aa20.24■□□□□ 0.83
CLN6-207ENST00000566347 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.24■□□□□ 0.832e-8■■■□□ 18
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms