RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 BEST1O76090 585 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 ZNF286BP0CG31 522 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 NCAM1P13591 858 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 MRPL19P49406 292 aaKnown RBP21.7■■□□□ 1.06
SPSB3-208ENST00000566339 COL13A1Q5TAT6 717 aaPredicted RBP21.7■■□□□ 1.06
SPSB3-208ENST00000566339 BTBD8Q5XKL5 378 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 NEPROQ6NW34 567 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 ESRP1Q6NXG1 681 aaKnown RBP21.7■■□□□ 1.06
SPSB3-208ENST00000566339 DENND6AQ8IWF6 608 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 DOK1Q99704 481 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 OMDQ99983 421 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 HIPK3Q9H422 1215 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 FAIMQ9NVQ4 179 aa21.7■■□□□ 1.06
SPSB3-208ENST00000566339 KANSL1LA0AUZ9 987 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 YJEFN3A6XGL0 299 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 GOLGA8TH3BQL2 631 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 AKAP10O43572 662 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 GPIP06744 558 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 FGF4P08620 206 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 NAA20P61599 178 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 SFSWAPQ12872 951 aaKnown RBP21.69■■□□□ 1.06
SPSB3-208ENST00000566339 CTBP1Q13363 440 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 MYO1HQ8N1T3 1032 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 FATE1Q969F0 183 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 MOCOSQ96EN8 888 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 UBXN10Q96LJ8 280 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 ZIC5Q96T25 663 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 SEMA6AQ9H2E6 1030 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 GID8Q9NWU2 228 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 CCDC167Q9P0B6 97 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 TMEM9Q9P0T7 183 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 FAF1Q9UNN5 650 aaPredicted RBP21.69■■□□□ 1.06
SPSB3-208ENST00000566339 MYOCOSA0A1B0GUC4 107 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 NDST2P52849 883 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 MAP3K7CLP57077 242 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 SPIDRQ14159 915 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 GJC2Q5T442 439 aaPredicted RBP21.69■■□□□ 1.06
SPSB3-208ENST00000566339 Q6ZNX1 250 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 FAM35AQ86V20 835 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 GPR180Q86V85 440 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 ATPAF2Q8N5M1 289 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 PNPT1Q8TCS8 783 aaKnown RBP21.69■■□□□ 1.06
SPSB3-208ENST00000566339 CIB1Q99828 191 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 TKTL2Q9H0I9 626 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 GSTO2Q9H4Y5 243 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 NOL11Q9H8H0 719 aaKnown RBP21.69■■□□□ 1.06
SPSB3-208ENST00000566339 ACTR3BQ9P1U1 418 aa21.69■■□□□ 1.06
SPSB3-208ENST00000566339 ZNF638Q14966 1978 aaKnown RBP21.68■■□□□ 1.06
SPSB3-208ENST00000566339 TRIM64BA6NI03 449 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 CLDN5O00501 218 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 WISP3O95389 354 aaPredicted RBP21.68■■□□□ 1.06
SPSB3-208ENST00000566339 MATN4O95460 622 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 FASP25445 335 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 HMOX2P30519 316 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 FKBP1BP68106 108 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 GRIK2Q13002 908 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 BRMS1LQ5PSV4 323 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 TMTC4Q5T4D3 741 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 RANBP10Q6VN20 620 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 OTOP3Q7RTS5 596 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 SPRED1Q7Z699 444 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 CLYBLQ8N0X4 340 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 PPWD1Q96BP3 646 aaKnown RBP21.68■■□□□ 1.06
SPSB3-208ENST00000566339 SGF29Q96ES7 293 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 TUBA1CQ9BQE3 449 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 FICDQ9BVA6 458 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 CATSPERBQ9H7T0 1116 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 AGPAT4Q9NRZ5 378 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 TMEM45AQ9NWC5 275 aa21.68■■□□□ 1.06
SPSB3-208ENST00000566339 CBFA2T3O75081 653 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 VPS4BO75351 444 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 CSPG5O95196 566 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 MMP3P08254 477 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 F7P08709 466 aaPredicted RBP21.67■■□□□ 1.06
SPSB3-208ENST00000566339 UMPSP11172 480 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 HNRNPLP14866 589 aaKnown RBP eCLIP21.67■■□□□ 1.06
SPSB3-208ENST00000566339 GPX3P22352 226 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 SLC7A2P52569 658 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 ATXN3P54252 364 aaPredicted RBP21.67■■□□□ 1.06
SPSB3-208ENST00000566339 POU6F1Q14863 301 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 ATP6AP1Q15904 470 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 SLC36A3Q495N2 470 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 ZNF470Q6ECI4 717 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 KLHL35Q6PF15 583 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 TTC33Q6PID6 262 aaPredicted RBP21.67■■□□□ 1.06
SPSB3-208ENST00000566339 FAM47BQ8NA70 645 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 LEMD2Q8NC56 503 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 SEPT8Q92599 483 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 CENPNQ96H22 339 aaPredicted RBP21.67■■□□□ 1.06
SPSB3-208ENST00000566339 SMOQ99835 787 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 BEGAINQ9BUH8 593 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 ZNF510Q9Y2H8 683 aa21.67■■□□□ 1.06
SPSB3-208ENST00000566339 THSD7BQ9C0I4 1608 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 DHRS12A0PJE2 317 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 TYW5A2RUC4 315 aaKnown RBP21.66■■□□□ 1.06
SPSB3-208ENST00000566339 MBLAC1A4D2B0 266 aaPredicted RBP21.66■■□□□ 1.06
SPSB3-208ENST00000566339 SNAP91O60641 907 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 PSMA4P25789 261 aaKnown RBP21.66■■□□□ 1.06
SPSB3-208ENST00000566339 MERTKQ12866 999 aa21.66■■□□□ 1.06
SPSB3-208ENST00000566339 NOGQ13253 232 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms