RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ACSM2AQ08AH3 577 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 CAPSQ13938 189 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 ARHGEF6Q15052 776 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 KYNUQ16719 465 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 SOWAHAQ2M3V2 549 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 USP41Q3LFD5 358 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 ESCO2Q56NI9 601 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 C1orf141Q5JVX7 400 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 C1QTNF12Q5T7M4 302 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 ACSM2BQ68CK6 577 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 CFAP77Q6ZQR2 320 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 QSOX2Q6ZRP7 698 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 SEPT14Q6ZU15 432 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 DENND5BQ6ZUT9 1274 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 MRGPRGQ86SM5 289 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 HAPLN4Q86UW8 402 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 KBTBD6Q86V97 674 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 VSIG1Q86XK7 387 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 LDLRAD3Q86YD5 345 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 DENND6AQ8IWF6 608 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 CCDC13Q8IYE1 715 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 HORMAD2Q8N7B1 307 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 POGLUT1Q8NBL1 392 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 HJURPQ8NCD3 748 aaPredicted RBP5.18□□□□□ -1.58
CNOT1-209ENST00000566240 APPL2Q8NEU8 664 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 SEMA6DQ8NFY4 1073 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 HUS1BQ8NHY5 278 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 EME1Q96AY2 570 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 ZNF333Q96JL9 665 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 SLITRK1Q96PX8 696 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 FIZ1Q96SL8 496 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 TUBB6Q9BUF5 446 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 TMEM45AQ9NWC5 275 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 ANKRD10Q9NXR5 420 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 PADI1Q9ULC6 663 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 HS3ST3A1Q9Y663 406 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 MAU2Q9Y6X3 613 aa5.18□□□□□ -1.58
CNOT1-209ENST00000566240 TRBV5-3A0A0A0MS03 114 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 hCG_1809904A0A1W2PP81 198 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 A0A1W2PPE2 198 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 A0A1W2PR64 198 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 LRRC3CA6NJW4 275 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 TBX10O75333 385 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 IGLV2-14P01704 120 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 MMP3P08254 477 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 ENO3P13929 434 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-209ENST00000566240 PPP5CP53041 499 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 TMPRSS3P57727 454 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 RPS13P62277 151 aaKnown RBP5.17□□□□□ -1.58
CNOT1-209ENST00000566240 ZBED6P86452 979 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 SORDQ00796 357 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 LPIN1Q14693 890 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 PCGF3Q3KNV8 242 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 SOWAHCQ53LP3 525 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-209ENST00000566240 ADALQ6DHV7 355 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 MIS18BP1Q6P0N0 1132 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 FAM217AQ8IXS0 508 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 SLC35F3Q8IY50 421 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 RNF168Q8IYW5 571 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-209ENST00000566240 PARP16Q8N5Y8 322 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 KDM1BQ8NB78 822 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 IGFBPL1Q8WX77 278 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 TTC14Q96N46 770 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 SEPT5Q99719 369 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-209ENST00000566240 TMEM47Q9BQJ4 181 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 WDR83Q9BRX9 315 aaKnown RBP5.17□□□□□ -1.58
CNOT1-209ENST00000566240 B3GNT4Q9C0J1 378 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 LHPPQ9H008 270 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 HRH4Q9H3N8 390 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 OSGEPL1Q9H4B0 414 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 ARHGEF38Q9NXL2 777 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 WSB2Q9NYS7 404 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-209ENST00000566240 MYRFQ9Y2G1 1151 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 R3HDM2Q9Y2K5 976 aaKnown RBP5.17□□□□□ -1.58
CNOT1-209ENST00000566240 CMAHPQ9Y471 501 aa5.17□□□□□ -1.58
CNOT1-209ENST00000566240 LINC01548A6NM66 108 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 ADAMDEC1O15204 470 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 PAPSS1O43252 624 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-209ENST00000566240 MITFO75030 526 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-209ENST00000566240 MTA2O94776 668 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 HSPA4LO95757 839 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 MMP2P08253 660 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 MYZAPP0CAP1 466 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 EEF1DP29692 281 aaKnown RBP5.16□□□□□ -1.58
CNOT1-209ENST00000566240 CAPZA2P47755 286 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 LIG4P49917 911 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 GHRHRQ02643 423 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 KLF10Q13118 480 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 NAE1Q13564 534 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 BAATQ14032 418 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-209ENST00000566240 C15orf59Q2T9L4 293 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-209ENST00000566240 SMTNL2Q2TAL5 461 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 CDONQ4KMG0 1287 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 PIK3CD-AS1Q5SR53 167 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 ERMARDQ5T6L9 678 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 KIAA1614Q5VZ46 1190 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 HIST2H2BCQ6DN03 193 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 HIST2H2BDQ6DRA6 164 aa5.16□□□□□ -1.58
CNOT1-209ENST00000566240 ZNF782Q6ZMW2 699 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-209ENST00000566240 WDR63Q8IWG1 891 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms