RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 IFNB1P01574 187 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CRHR1P34998 444 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 NOVP48745 357 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PURAQ00577 322 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 GNA12Q03113 381 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CBX2Q14781 532 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 SLC36A3Q495N2 470 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MON1BQ7L1V2 547 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RALGPS2Q86X27 583 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 C12orf56Q8IXR9 622 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ZNF786Q8N393 782 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 LRRC46Q96FV0 321 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 FIZ1Q96SL8 496 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 DGCR6LQ9BY27 220 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ZNF717Q9BY31 904 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 C2orf40Q9H1Z8 148 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 DSN1Q9H410 356 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PLSCR2Q9NRY7 297 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 USP22Q9UPT9 525 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PLLPQ9Y342 182 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 hCG_1818297A0A087WSY0 165 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CDH1P12830 882 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TRIM23P36406 574 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 NLRP11P59045 1033 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 RACK1P63244 317 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 DMC1Q14565 340 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 HIST2H2ACQ16777 129 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 CCNYL2Q5T2Q4 361 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 SFRP1Q8N474 314 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 C8orf48Q96LL4 319 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TINF2Q9BSI4 451 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ADI1Q9BV57 179 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 LIN7BQ9HAP6 207 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ZNF304Q9HCX3 659 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 USE1Q9NZ43 259 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TMEM5Q9Y2B1 443 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MN1Q10571 1320 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 FAM86C2PA6NEL3 165 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MEN1O00255 615 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 SRP72O76094 671 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 BCL10O95999 233 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MAGEA11P43364 429 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RHDQ02161 417 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ACAP2Q15057 778 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CALCRLQ16602 461 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 RARS2Q5T160 578 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 AGAP9Q5VTM2 703 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PDPK2PQ6A1A2 396 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 C16orf89Q6UX73 402 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 KCTD8Q6ZWB6 473 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 STRADAQ7RTN6 431 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 KRT77Q7Z794 578 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CLEC14AQ86T13 490 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.93□□□□□ -1.94
CHD9-218ENST00000566029 DYNC2LI1Q8TCX1 351 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 FBXL20Q96IG2 436 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 REEP2Q9BRK0 252 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 SPANXB1Q9NS25 103 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 MRPL39Q9NYK5 338 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 SRRDQ9UH36 339 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TESMINQ9Y4I5 508 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 A0A1B0GTI1 187 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 H0YIN7 160 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 NFIBO00712 420 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ZBTB39O15060 712 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 FGF19O95750 216 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 JUNP05412 331 aaKnown RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 HK2P52789 917 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MAPK10P53779 464 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ABATP80404 500 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 DDR2Q16832 855 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CCDC157Q569K6 752 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 FAXCQ5TGI0 409 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 FAM205BPQ63HN1 556 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 STEAP4Q687X5 459 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 LGI2Q8N0V4 545 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 OR2T34Q8NGX1 318 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 SDR42E1Q8WUS8 393 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 MUL1Q969V5 352 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 C19orf60Q96EN9 201 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PIGSQ96S52 555 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CPVLQ9H3G5 476 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 WDR26Q9H7D7 661 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ZDHHC4Q9NPG8 344 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 FAM86C1Q9NVL1 165 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ATF5Q9Y2D1 282 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 FAM159BA6NKW6 160 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PSTPIP1O43586 416 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ADRB2P07550 413 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 ZNF182P17025 639 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 FAM182AQ5T1J6 154 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 VWA5B1Q5TIE3 1220 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 C12orf60Q5U649 245 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 C1orf94Q6P1W5 598 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 PLCZ1Q86YW0 608 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 TOR1AIP2Q8NFQ8 470 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 EFCAB1Q9HAE3 211 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 CD320Q9NPF0 282 aa2.93□□□□□ -1.94
CHD9-218ENST00000566029 KRCC1Q9NPI7 259 aaPredicted RBP2.93□□□□□ -1.94
CHD9-218ENST00000566029 ATP13A2Q9NQ11 1180 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms