RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 TRAF2Q12933 501 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 MTM1Q13496 603 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 FZD2Q14332 565 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 LIPIQ6XZB0 460 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 MACC1Q6ZN28 852 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 USP45Q70EL2 814 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 DAAM2Q86T65 1068 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 ATL2Q8NHH9 583 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 RBM41Q96IZ5 413 aaKnown RBP19.95■□□□□ 0.78
CMTM3-211ENST00000565922 WASF3Q9UPY6 502 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 PCDHGA1Q9Y5H4 931 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 RAI2Q9Y5P3 530 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 LRP4O75096 1905 aa19.95■□□□□ 0.78
CMTM3-211ENST00000565922 TTC24A2A3L6 582 aaPredicted RBP19.94■□□□□ 0.78
CMTM3-211ENST00000565922 HYAL3O43820 417 aaPredicted RBP19.94■□□□□ 0.78
CMTM3-211ENST00000565922 ZRANB2O95218 330 aaKnown RBP eCLIP19.94■□□□□ 0.78
CMTM3-211ENST00000565922 PRKCGP05129 697 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 C1SP09871 688 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 ATXN1LP0C7T5 689 aaKnown RBP19.94■□□□□ 0.78
CMTM3-211ENST00000565922 VIPR1P32241 457 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 CDKN2BP42772 138 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 BLKP51451 505 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 VAV2P52735 878 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 NAP1L1P55209 391 aaKnown RBP19.94■□□□□ 0.78
CMTM3-211ENST00000565922 ARHGEF7Q14155 803 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 MFSD7Q6UXD7 560 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 KIAA1328Q86T90 577 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 KATNAL2Q8IYT4 538 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 TPCN2Q8NHX9 752 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 NSMCE3Q96MG7 304 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 DUSP23Q9BVJ7 150 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 MBNL1Q9NR56 388 aaKnown RBP19.94■□□□□ 0.78
CMTM3-211ENST00000565922 EVA1BQ9NVM1 165 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 TOR4AQ9NXH8 423 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 B4GALT6Q9UBX8 382 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 DNPEPQ9ULA0 475 aa19.94■□□□□ 0.78
CMTM3-211ENST00000565922 GOLGA8CPA6NN73 597 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 PSMD11O00231 422 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 RECQL5O94762 991 aaPredicted RBP19.93■□□□□ 0.78
CMTM3-211ENST00000565922 DKK1O94907 266 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 HLA-DQB2P05538 268 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 TGM2P21980 687 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 EPHB1P54762 984 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 IFI35P80217 286 aaPredicted RBP19.93■□□□□ 0.78
CMTM3-211ENST00000565922 AP1B1Q10567 949 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 ZNF211Q13398 564 aaPredicted RBP19.93■□□□□ 0.78
CMTM3-211ENST00000565922 ACOX1Q15067 660 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 TAZQ16635 292 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 WSCD2Q2TBF2 565 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 TFDP3Q5H9I0 405 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 RAD9BQ6WBX8 426 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 SLCO6A1Q86UG4 719 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 CCDC50Q8IVM0 306 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 RCOR2Q8IZ40 523 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 CHCHD4Q8N4Q1 142 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 OR4C6Q8NH72 309 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 SCRN2Q96FV2 425 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 TBATAQ96M53 351 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 OLFM3Q96PB7 478 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 LGMNQ99538 433 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 TFR2Q9UP52 801 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 CSNK1G3Q9Y6M4 447 aa19.93■□□□□ 0.78
CMTM3-211ENST00000565922 PCCBP05166 539 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 JUNDP17535 347 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 RPL26P61254 145 aaKnown RBP19.92■□□□□ 0.78
CMTM3-211ENST00000565922 DYNLT1P63172 113 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 SEMG2Q02383 582 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 DSC2Q02487 901 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 SPOCD1Q6ZMY3 1216 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 GALNT15Q8N3T1 639 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 SLC25A45Q8N413 288 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 PNPLA1Q8N8W4 532 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 SPC24Q8NBT2 197 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 EXD1Q8NHP7 514 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 MCCC1Q96RQ3 725 aaPredicted RBP19.92■□□□□ 0.78
CMTM3-211ENST00000565922 IL12RB2Q99665 862 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 SLC13A1Q9BZW2 595 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 GOLPH3Q9H4A6 298 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 NLGN3Q9NZ94 848 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 SPASTQ9UBP0 616 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 RPL26L1Q9UNX3 145 aaKnown RBP19.92■□□□□ 0.78
CMTM3-211ENST00000565922 PPIL1Q9Y3C6 166 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 MSRB2Q9Y3D2 182 aa19.92■□□□□ 0.78
CMTM3-211ENST00000565922 KCNK1O00180 336 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 SCAMP1O15126 338 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 PJA2O43164 708 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 FZD6O60353 706 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 CST8O60676 142 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 RFPL3O75679 317 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 HEXIM1O94992 359 aaKnown RBP19.91■□□□□ 0.78
CMTM3-211ENST00000565922 JCHAINP01591 159 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 CKMT2P17540 419 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 KELP23276 732 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 GSDMDP57764 484 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 COPS2P61201 443 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 EIF2B5Q13144 721 aaKnown RBP19.91■□□□□ 0.78
CMTM3-211ENST00000565922 ILKQ13418 452 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 INPP5AQ14642 412 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 NFATC4Q14934 902 aa19.91■□□□□ 0.78
CMTM3-211ENST00000565922 CNGA3Q16281 694 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms