RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 VPS18Q9P253 973 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 SLC2A6Q9UGQ3 507 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 SUN2Q9UH99 717 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 SLC24A2Q9UI40 661 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 PHTF1Q9UMS5 762 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 ARL5AQ9Y689 179 aa18.83■□□□□ 0.61
COMMD4-213ENST00000565834 A0A0J9YYE9 177 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 ANTXRLA6NF34 631 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 FAM159BA6NKW6 160 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 PIAS1O75925 651 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 SYF2O95926 243 aaKnown RBP18.82■□□□□ 0.6
COMMD4-213ENST00000565834 TRBC1P01850 177 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 C1QAP02745 245 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 CTSLP07711 333 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 CTPS1P17812 591 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 ABL2P42684 1182 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 SEC13P55735 322 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 MGAT5Q09328 741 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 GRSF1Q12849 480 aaKnown RBP eCLIP18.82■□□□□ 0.6
COMMD4-213ENST00000565834 ELAVL3Q14576 367 aaKnown RBP18.82■□□□□ 0.6
COMMD4-213ENST00000565834 TAF1AQ15573 450 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-213ENST00000565834 ZSWIM9Q86XI8 627 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 CHPFQ8IZ52 775 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 NDUFAF2Q8N183 169 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 STK40Q8N2I9 435 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 SPOCK2Q92563 424 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 CDKL2Q92772 493 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 EZH1Q92800 747 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-213ENST00000565834 PEX13Q92968 403 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 MRRFQ96E11 262 aaKnown RBP18.82■□□□□ 0.6
COMMD4-213ENST00000565834 MSANTD3Q96H12 275 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 PAFAH2Q99487 392 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 TMBIM4Q9HC24 238 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 MAGEE1Q9HCI5 957 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 C20orf96Q9NUD7 363 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-213ENST00000565834 STON1Q9Y6Q2 735 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 CKAP5Q14008 2032 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 C2orf81A6NN90 581 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 CDH16O75309 829 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 PRNPP04156 253 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 EPHX1P07099 455 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 BMP1P13497 986 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 DRD1P21728 446 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 MSH2P43246 934 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 KIR2DL1P43626 348 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-213ENST00000565834 CNGA3Q16281 694 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 TMEM196Q5HYL7 178 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 PDPK2PQ6A1A2 396 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 KIAA0930Q6ICG6 404 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-213ENST00000565834 FSTL4Q6MZW2 842 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 BRAT1Q6PJG6 821 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 KCNMB4Q86W47 210 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 RASSF3Q86WH2 238 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 LRRC6Q86X45 466 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 RIBC1Q8N443 379 aaPredicted RBP18.82■□□□□ 0.6
COMMD4-213ENST00000565834 PPM1NQ8N819 430 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 MDGA1Q8NFP4 955 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 SRPK1Q96SB4 655 aaKnown RBP18.82■□□□□ 0.6
COMMD4-213ENST00000565834 TRABDQ9H4I3 376 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 SMYD2Q9NRG4 433 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 IL1RAPL1Q9NZN1 696 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 RIMKLBQ9ULI2 386 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 KCTD3Q9Y597 815 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 IKBKGQ9Y6K9 419 aa18.82■□□□□ 0.6
COMMD4-213ENST00000565834 CAPN8A6NHC0 703 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 CXorf49A8MYA2 514 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-213ENST00000565834 AURKAO14965 403 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 RGS16O15492 202 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-213ENST00000565834 EGFP01133 1207 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 SLC4A1P02730 911 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 ALPIP09923 528 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 ERVK-10P10266 1014 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 GCAP28676 217 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 TIE1P35590 1138 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 POLR2LP62875 67 aaKnown RBP18.81■□□□□ 0.6
COMMD4-213ENST00000565834 PDE1BQ01064 536 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 ENPP2Q13822 863 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 SMAD1Q15797 465 aaKnown RBP18.81■□□□□ 0.6
COMMD4-213ENST00000565834 SKIDA1Q1XH10 827 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 ZNF805Q5CZA5 627 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 TDRPQ86YL5 185 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 STYXQ8WUJ0 223 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 ZFATQ9P243 1243 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 PSMC3IPQ9P2W1 217 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-213ENST00000565834 ZNF711Q9Y462 761 aa18.81■□□□□ 0.6
COMMD4-213ENST00000565834 TSPAN11A1L157 253 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 GOLGA8KD6RF30 607 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 BUD23O43709 281 aaKnown RBP18.8■□□□□ 0.6
COMMD4-213ENST00000565834 VAPBO95292 243 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 INHBAP08476 426 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 ZNF140P52738 457 aaPredicted RBP18.8■□□□□ 0.6
COMMD4-213ENST00000565834 NAB1Q13506 487 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 PTPRRQ15256 657 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 IER5LQ5T953 404 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 USP45Q70EL2 814 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 DSG4Q86SJ6 1040 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 ADHFE1Q8IWW8 467 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 TMIEQ8NEW7 156 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 OR13J1Q8NGT2 312 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 SLC44A1Q8WWI5 657 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms