RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 KCTD16Q68DU8 428 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 LIPIQ6XZB0 460 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 RD3Q7Z3Z2 195 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 FSTL5Q8N475 847 aaPredicted RBP17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 PAF1Q8N7H5 531 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 CPLX3Q8WVH0 158 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 GLMNQ92990 594 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 CSPG4P5Q96PW8 444 aa17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 BZW2Q9Y6E2 419 aaKnown RBP17.52■□□□□ 0.4
MAP1LC3B-207ENST00000565788 RRP8O43159 456 aaKnown RBP17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 RECQL5O94762 991 aaPredicted RBP17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 RASGRP1O95267 797 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PEX11BO96011 259 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ELFN1P0C7U0 828 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 CTSEP14091 401 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 RPIAP49247 311 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 RENBPP51606 427 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 SRP54P61011 504 aaKnown RBP17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 SLC25A11Q02978 314 aaKnown RBP17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 COL9A2Q14055 689 aaPredicted RBP17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PIGHQ14442 188 aaPredicted RBP17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ZNF235Q14590 738 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ISXQ2M1V0 245 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 TMCO3Q6UWJ1 677 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 DPPA4Q7L190 304 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PGBD5Q8N414 524 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PCDH19Q8TAB3 1148 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 SYN2Q92777 582 aaPredicted RBP17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PDXPQ96GD0 296 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 WDR92Q96MX6 357 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ZNF599Q96NL3 588 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 BBC3Q96PG8 261 aaPredicted RBP17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PCDH18Q9HCL0 1135 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 SIRPGQ9P1W8 387 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 KLQ9UEF7 1012 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ANAPC7Q9UJX3 599 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 DOLKQ9UPQ8 538 aa17.51■□□□□ 0.39
MAP1LC3B-207ENST00000565788 A0A087X0T9 212 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 A8MX80 341 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 MAFKO60675 156 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 SERPING1P05155 500 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ALPIP09923 528 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 FAM228BP0C875 321 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 CR2P20023 1033 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 POLR2LP62875 67 aaKnown RBP17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ZBED6P86452 979 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 CCDC173Q0VFZ6 552 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ELOCQ15369 112 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ESRP1Q6NXG1 681 aaKnown RBP17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 NIPA2Q8N8Q9 360 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 KYQ8NBH2 561 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 TEKT4Q8WW24 435 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 NAT6Q93015 286 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 FUBP1Q96AE4 644 aaKnown RBP17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 NUP85Q9BW27 656 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 POLR1BQ9H9Y6 1135 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 GULP1Q9UBP9 304 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 B4GALT6Q9UBX8 382 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 IP6K2Q9UHH9 426 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PADI4Q9UM07 663 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 CAPN11Q9UMQ6 739 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PCDHGC4Q9Y5F7 938 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 RAI2Q9Y5P3 530 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 IGSF10Q6WRI0 2623 aa17.5■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ATRXP46100 2492 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PTPRQQ9UMZ3 2332 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 A0A1W2PNU3 283 aaPredicted RBP17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 HTRA2O43464 458 aaPredicted RBP17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 CYP1A2P05177 515 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 LSSP48449 732 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 KIAA1024LP59773 190 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 MAXP61244 160 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 NFKBIBQ15653 356 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 KIF26BQ2KJY2 2108 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 C3orf38Q5JPI3 329 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 RBM44Q6ZP01 1051 aaKnown RBP17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PELI3Q8N2H9 469 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ATPAF2Q8N5M1 289 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ARL10Q8N8L6 244 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ATL2Q8NHH9 583 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 TPCN2Q8NHX9 752 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PDCD6IPQ8WUM4 868 aaKnown RBP17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 OR1E3Q8WZA6 343 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ATXN7L3BQ96GX2 97 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ZNF578Q96N58 590 aaPredicted RBP17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 NUDCD1Q96RS6 583 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 CCDC3Q9BQI4 270 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 MGME1Q9BQP7 344 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 PRORYQ9H606 182 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 SATB2Q9UPW6 733 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 ENTPD2Q9Y5L3 495 aa17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 SMG1Q96Q15 3661 aaKnown RBP17.49■□□□□ 0.39
MAP1LC3B-207ENST00000565788 TMEM202A6NGA9 273 aa17.48■□□□□ 0.39
MAP1LC3B-207ENST00000565788 DXOO77932 396 aaKnown RBP17.48■□□□□ 0.39
MAP1LC3B-207ENST00000565788 CPP00450 1065 aa17.48■□□□□ 0.39
MAP1LC3B-207ENST00000565788 TNFP01375 233 aa17.48■□□□□ 0.39
MAP1LC3B-207ENST00000565788 GYPCP04921 128 aa17.48■□□□□ 0.39
MAP1LC3B-207ENST00000565788 HSPA9P38646 679 aaKnown RBP17.48■□□□□ 0.39
MAP1LC3B-207ENST00000565788 TRAF2Q12933 501 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms