RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 CALR3Q96L12 384 aaKnown RBP12.36□□□□□ -0.43
SPG7-211ENST00000565370 TSGA13Q96PP4 275 aa12.36□□□□□ -0.43
SPG7-211ENST00000565370 RNF157Q96PX1 679 aa12.36□□□□□ -0.43
SPG7-211ENST00000565370 NOD2Q9HC29 1040 aa12.36□□□□□ -0.43
SPG7-211ENST00000565370 TOR4AQ9NXH8 423 aa12.36□□□□□ -0.43
SPG7-211ENST00000565370 KCTD5Q9NXV2 234 aa12.36□□□□□ -0.43
SPG7-211ENST00000565370 NLGN3Q9NZ94 848 aa12.36□□□□□ -0.43
SPG7-211ENST00000565370 NCKIPSDQ9NZQ3 722 aa12.36□□□□□ -0.43
SPG7-211ENST00000565370 DNPEPQ9ULA0 475 aa12.36□□□□□ -0.43
SPG7-211ENST00000565370 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.36□□□□□ -0.43
SPG7-211ENST00000565370 LRRK1Q38SD2 2015 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 A0A0A6YYK5 440 aaPredicted RBP12.35□□□□□ -0.43
SPG7-211ENST00000565370 HTRA2O43464 458 aaPredicted RBP12.35□□□□□ -0.43
SPG7-211ENST00000565370 MAP3K6O95382 1288 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 LCA5LO95447 670 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 TOP3BO95985 862 aaKnown RBP12.35□□□□□ -0.43
SPG7-211ENST00000565370 CCNB1P14635 433 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 JUNDP17535 347 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 CKMT2P17540 419 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 ITIH2P19823 946 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 KELP23276 732 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 VIPR1P32241 457 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 ACADVLP49748 655 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 PEX5P50542 639 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 EPHB1P54762 984 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 GBE1Q04446 702 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 RALGDSQ12967 914 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 ZNF211Q13398 564 aaPredicted RBP12.35□□□□□ -0.43
SPG7-211ENST00000565370 ARHGEF7Q14155 803 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 PDK1Q15118 436 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 C11orf63Q6NUN7 778 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 SLCO6A1Q86UG4 719 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 PHACTR4Q8IZ21 702 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 PGBD5Q8N414 524 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 PQLC3Q8N755 202 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 MAML1Q92585 1016 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 NUS1Q96E22 293 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 TBATAQ96M53 351 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 SEMA3CQ99985 751 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 SLC13A1Q9BZW2 595 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 USP29Q9HBJ7 922 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 DTLQ9NZJ0 730 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 SPASTQ9UBP0 616 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 B4GALT6Q9UBX8 382 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 PHTF1Q9UMS5 762 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 PCDHGC4Q9Y5F7 938 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 PCDHA13Q9Y5I0 950 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 HEY1Q9Y5J3 304 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 FRYQ5TBA9 3013 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 FAM208BQ5VWN6 2430 aa12.35□□□□□ -0.43
SPG7-211ENST00000565370 PSMD11O00231 422 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 CACNB4O00305 520 aaPredicted RBP12.34□□□□□ -0.43
SPG7-211ENST00000565370 SCAMP1O15126 338 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 AQP9O43315 295 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 SIGLEC6O43699 453 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 RECQL5O94762 991 aaPredicted RBP12.34□□□□□ -0.43
SPG7-211ENST00000565370 DKK1O94907 266 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 NDUFA10O95299 355 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 PGLSO95336 258 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 PROS1P07225 676 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 COMTP21964 271 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 DUSP3P51452 185 aaPredicted RBP12.34□□□□□ -0.43
SPG7-211ENST00000565370 DYNLT1P63172 113 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 PPARDQ03181 441 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 TRAF2Q12933 501 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 DNAJC3Q13217 504 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 TFDP2Q14188 446 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 NFATC4Q14934 902 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 ACOX1Q15067 660 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 WSCD2Q2TBF2 565 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 ZNF542PQ5EBM4 170 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 SLC9A4Q6AI14 798 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 ALG1LQ6GMV1 187 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 LIPIQ6XZB0 460 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 BZW1Q7L1Q6 419 aaKnown RBP12.34□□□□□ -0.43
SPG7-211ENST00000565370 PLD5Q8N7P1 536 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 LMX1AQ8TE12 382 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 GLMNQ92990 594 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 RBM41Q96IZ5 413 aaKnown RBP12.34□□□□□ -0.43
SPG7-211ENST00000565370 BRD8Q9H0E9 1235 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 WDR26Q9H7D7 661 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 MBNL1Q9NR56 388 aaKnown RBP12.34□□□□□ -0.43
SPG7-211ENST00000565370 RBM22Q9NW64 420 aaKnown RBP eCLIP12.34□□□□□ -0.431e-9■■■■□ 21.2
SPG7-211ENST00000565370 UCKL1Q9NWZ5 548 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 KLQ9UEF7 1012 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 RAI2Q9Y5P3 530 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 CSNK1G3Q9Y6M4 447 aa12.34□□□□□ -0.43
SPG7-211ENST00000565370 ATRXP46100 2492 aa12.33□□□□□ -0.44
SPG7-211ENST00000565370 TTC24A2A3L6 582 aaPredicted RBP12.33□□□□□ -0.44
SPG7-211ENST00000565370 FAM221BA6H8Z2 402 aa12.33□□□□□ -0.44
SPG7-211ENST00000565370 SOWAHDA6NJG2 315 aa12.33□□□□□ -0.44
SPG7-211ENST00000565370 C1QTNF9BB2RNN3 333 aa12.33□□□□□ -0.44
SPG7-211ENST00000565370 PDE2AO00408 941 aaPredicted RBP12.33□□□□□ -0.44
SPG7-211ENST00000565370 RASGRP1O95267 797 aa12.33□□□□□ -0.44
SPG7-211ENST00000565370 HLA-DQB2P05538 268 aa12.33□□□□□ -0.44
SPG7-211ENST00000565370 ALPIP09923 528 aa12.33□□□□□ -0.44
SPG7-211ENST00000565370 C1QTNF9P0C862 333 aa12.33□□□□□ -0.44
SPG7-211ENST00000565370 ZNF30P17039 623 aa12.33□□□□□ -0.44
SPG7-211ENST00000565370 FECHP22830 423 aa12.33□□□□□ -0.44
SPG7-211ENST00000565370 ACP1P24666 158 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms