RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 HLA-EP13747 358 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 HNRNPLP14866 589 aaKnown RBP eCLIP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 TPH1P17752 444 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 DRD1P21728 446 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 SDHBP21912 280 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 PRKCHP24723 683 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 SERPINA4P29622 427 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 HSD17B3P37058 310 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 ELK3P41970 407 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 IL12RB1P42701 662 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 NPY2RP49146 381 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 SEC13P55735 322 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 GRSF1Q12849 480 aaKnown RBP eCLIP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 GALNT3Q14435 633 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 CCDC6Q16204 474 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 HNRNPA1L2Q32P51 320 aaKnown RBP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 CCDC38Q502W7 563 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 SIRPB2Q5JXA9 342 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 CERCAMQ5T4B2 595 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 ARMC12Q5T9G4 340 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 EMC10Q5UCC4 262 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 FSTL4Q6MZW2 842 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 CASC4Q6P4E1 433 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 PRR23CQ6ZRP0 262 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 TRMT10CQ7L0Y3 403 aaKnown RBP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 CAMK1DQ8IU85 385 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 AGGF1Q8N302 714 aaeCLIP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 MPP5Q8N3R9 675 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 PAF1Q8N7H5 531 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 ZNF513Q8N8E2 541 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 CHST14Q8NCH0 376 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 LPCAT1Q8NF37 534 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 NETO1Q8TDF5 533 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 PDCD6IPQ8WUM4 868 aaKnown RBP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 UBLCP1Q8WVY7 318 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 EZH1Q92800 747 aaPredicted RBP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 SIGLEC10Q96LC7 697 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 TTC25Q96NG3 672 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 HEPHQ9BQS7 1158 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 WDR83Q9BRX9 315 aaKnown RBP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 ADGRE3Q9BY15 652 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 CPEB1Q9BZB8 566 aaKnown RBP11.16□□□□□ -0.62
SF3B3-205ENST00000564899 IL22Q9GZX6 179 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 CHRDQ9H2X0 955 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 TMEM245Q9H330 911 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 MTG2Q9H4K7 406 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 ARNT2Q9HBZ2 717 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 ZDHHC4Q9NPG8 344 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 SYBUQ9NX95 663 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 CACNA2D2Q9NY47 1150 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 SAMD15Q9P1V8 674 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 HCN2Q9UL51 889 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 MAD1L1Q9Y6D9 718 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 TEX264Q9Y6I9 313 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 ITPR1Q14643 2758 aa11.16□□□□□ -0.62
SF3B3-205ENST00000564899 ANTXRLA6NF34 631 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 CHURC1-FNTBB4DL54 471 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 NPC1O15118 1278 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 RIPK2O43353 540 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 HTRA2O43464 458 aaPredicted RBP11.15□□□□□ -0.62
SF3B3-205ENST00000564899 FZD6O60353 706 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 SIN3BO75182 1162 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 PGLSO95336 258 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 ACSL3O95573 720 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 EGFP01133 1207 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 PRLP01236 227 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 EPHX1P07099 455 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 PGAM1P18669 254 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 PMLP29590 882 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 FNTBP49356 437 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 EPHB1P54762 984 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 CRADDP78560 199 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 CASP8Q14790 479 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 GRM3Q14832 879 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 UAP1Q16222 522 aaPredicted RBP11.15□□□□□ -0.62
SF3B3-205ENST00000564899 KYNUQ16719 465 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 TMEM196Q5HYL7 178 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 SPDYCQ5MJ68 293 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 CFAP58Q5T655 872 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 N4BP2L1Q5TBK1 243 aaPredicted RBP11.15□□□□□ -0.62
SF3B3-205ENST00000564899 DENND2CQ68D51 928 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 ZNF852Q6ZMS4 543 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 CAPN12Q6ZSI9 719 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 IGDCC3Q8IVU1 814 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 PALM2Q8IXS6 379 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 CHPFQ8IZ52 775 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 PPHLN1Q8NEY8 458 aaKnown RBP11.15□□□□□ -0.62
SF3B3-205ENST00000564899 GRIN3AQ8TCU5 1115 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 FAM3CQ92520 227 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 PTPRN2Q92932 1015 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 STAMBPL1Q96FJ0 436 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 CFAP36Q96G28 342 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 ACOX2Q99424 681 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 EBNA1BP2Q99848 306 aaKnown RBP11.15□□□□□ -0.62
SF3B3-205ENST00000564899 PABPC3Q9H361 631 aaKnown RBP11.15□□□□□ -0.62
SF3B3-205ENST00000564899 VPS37BQ9H9H4 285 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 ZC3H7BQ9UGR2 993 aaKnown RBP11.15□□□□□ -0.62
SF3B3-205ENST00000564899 SUN2Q9UH99 717 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 IL36AQ9UHA7 158 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 PCDHB9Q9Y5E1 797 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms