RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ZNF143P52747 638 aaPredicted RBP14.18□□□□□ -0.14
CDR2-204ENST00000564542 ZFP36L1Q07352 338 aaKnown RBP14.18□□□□□ -0.14
CDR2-204ENST00000564542 NFATC3Q12968 1075 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 SRSF6Q13247 344 aaKnown RBP14.18□□□□□ -0.14
CDR2-204ENST00000564542 CLEC16AQ2KHT3 1053 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 LINC00303Q3SY05 128 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 CT47A1Q5JQC4 288 aaPredicted RBP14.18□□□□□ -0.14
CDR2-204ENST00000564542 SCYL2Q6P3W7 929 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 OGFOD3Q6PK18 319 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 SPRED1Q7Z699 444 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 ZSWIM9Q86XI8 627 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 PLA2G15Q8NCC3 412 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 OR56A4Q8NGH8 313 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 FAM117AQ9C073 453 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 LRRC19Q9H756 370 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 FGF22Q9HCT0 170 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 NLRC4Q9NPP4 1024 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 DONSONQ9NYP3 566 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 SEPT10Q9P0V9 454 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 FZD10Q9ULW2 581 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 HEMK1Q9Y5R4 338 aaPredicted RBP14.18□□□□□ -0.14
CDR2-204ENST00000564542 AHCTF1Q8WYP5 2266 aa14.18□□□□□ -0.14
CDR2-204ENST00000564542 TCRBV5S1A1TA0A578 114 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 ANKRD62A6NC57 917 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 TMEM202A6NGA9 273 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 EPHB6O15197 1021 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 BUB1BO60566 1050 aaPredicted RBP14.17□□□□□ -0.14
CDR2-204ENST00000564542 PRAMEF11O60813 436 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 ITIH1P19827 911 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 KELP23276 732 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 SERPINA4P29622 427 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 STAT1P42224 750 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 CSNK1DP48730 415 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 NDST2P52849 883 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 RALGDSQ12967 914 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 HLTFQ14527 1009 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■□□ 14.7
CDR2-204ENST00000564542 C14orf28Q4W4Y0 310 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 DNAJC24Q6P3W2 148 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 MON1BQ7L1V2 547 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 TAF8Q7Z7C8 310 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 CAMK1DQ8IU85 385 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 Q8N9G6 341 aaPredicted RBP14.17□□□□□ -0.14
CDR2-204ENST00000564542 FAM46DQ8NEK8 389 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 OR1E3Q8WZA6 343 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 FUBP1Q96AE4 644 aaKnown RBP14.17□□□□□ -0.14
CDR2-204ENST00000564542 ECHDC3Q96DC8 303 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 MCEEQ96PE7 176 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 CMKLR1Q99788 373 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 ARHGAP9Q9BRR9 750 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 ATP13A3Q9H7F0 1226 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 STARD5Q9NSY2 213 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 RNF215Q9Y6U7 377 aa14.17□□□□□ -0.14
CDR2-204ENST00000564542 PRAMEF33A0A0G2JMD5 474 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 B4DGG1 531 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 J3KR12 359 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 TNFRSF10CO14798 259 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 NUDT21O43809 227 aaKnown RBP14.16□□□□□ -0.14
CDR2-204ENST00000564542 PRAMEF10O60809 474 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 RECQL5O94762 991 aaPredicted RBP14.16□□□□□ -0.14
CDR2-204ENST00000564542 PRKCGP05129 697 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 HOXC4P09017 264 aaPredicted RBP14.16□□□□□ -0.14
CDR2-204ENST00000564542 ELFN1P0C7U0 828 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 CD82P27701 267 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 CSRP3P50461 194 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 TPI1P60174 286 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 KRT31Q15323 416 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 MANEAQ5SRI9 462 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 FKBP15Q5T1M5 1219 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 SPECC1LQ69YQ0 1117 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 SLITRK4Q8IW52 837 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 EXTL1Q92935 676 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 CNPY3Q9BT09 278 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 TMEM168Q9H0V1 697 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 VPS16Q9H269 839 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 MRPL40Q9NQ50 206 aaKnown RBP14.16□□□□□ -0.14
CDR2-204ENST00000564542 LRIT1Q9P2V4 623 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 PCDHGA4Q9Y5G9 962 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 BSNQ9UPA5 3926 aa14.16□□□□□ -0.14
CDR2-204ENST00000564542 A0A1W2PQC6 194 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 ARHGAP6O43182 974 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 TPM2P07951 284 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 SFTPCP11686 197 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 DESP17661 470 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 TRIM23P36406 574 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 ETV5P41161 510 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 RGRP47804 291 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 RPL7AP62424 266 aaKnown RBP14.15□□□□□ -0.14
CDR2-204ENST00000564542 ARHGEF7Q14155 803 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 SYCP1Q15431 976 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 TSR1Q2NL82 804 aaKnown RBP14.15□□□□□ -0.14
CDR2-204ENST00000564542 MAP9Q49MG5 647 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 PPP1R15BQ5SWA1 713 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 CDKAL1Q5VV42 579 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 AFMIDQ63HM1 303 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 LIPIQ6XZB0 460 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 DPPA4Q7L190 304 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 TMPRSS9Q7Z410 1059 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 SRLQ86TD4 932 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 VASH2Q86V25 355 aa14.15□□□□□ -0.14
CDR2-204ENST00000564542 SFTPA2Q8IWL1 248 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms