RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 H7C0C1 242 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 CILPO75339 1184 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 B3GAT3O94766 335 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 ACRP10323 421 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 MAGEA12P43365 314 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 ATP5OP48047 213 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 NDST1P52848 882 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 PRKAA2P54646 552 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 UPP1Q16831 310 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 HMBOX1Q6NT76 420 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 GALNT18Q6P9A2 607 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 CHSY3Q70JA7 882 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 DPH6Q7L8W6 267 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 CAMK1DQ8IU85 385 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 SLC7A5P1Q8MH63 180 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 TMEM199Q8N511 208 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 ATP6V0D2Q8N8Y2 350 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 SLC4A11Q8NBS3 891 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 APPL2Q8NEU8 664 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 OR13F1Q8NGS4 319 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 OR6B3Q8NGW1 331 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 RAB2BQ8WUD1 216 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 SLCO4A1Q96BD0 722 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 VWCEQ96DN2 955 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 FEM1CQ96JP0 617 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 FAM193BQ96PV7 902 aaPredicted RBP11.13□□□□□ -0.63
TCF4-222ENST00000564228 WDR12Q9GZL7 423 aaKnown RBP11.13□□□□□ -0.63
TCF4-222ENST00000564228 ILKAPQ9H0C8 392 aaPredicted RBP11.13□□□□□ -0.63
TCF4-222ENST00000564228 SEMA6AQ9H2E6 1030 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 POLR1BQ9H9Y6 1135 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 TBC1D13Q9NVG8 400 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 ARMC1Q9NVT9 282 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 ANKMY1Q9P2S6 941 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 PRKAG2Q9UGJ0 569 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 ADAM28Q9UKQ2 775 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 RAP2CQ9Y3L5 183 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 SNX13Q9Y5W8 968 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 PTPRSQ13332 1948 aa11.13□□□□□ -0.63
TCF4-222ENST00000564228 INPPL1O15357 1258 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 B4GALT3O60512 393 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 HUS1O60921 280 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 DDHD2O94830 711 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 MAP4P27816 1152 aaKnown RBP11.12□□□□□ -0.63
TCF4-222ENST00000564228 RPL9P32969 192 aaKnown RBP11.12□□□□□ -0.63
TCF4-222ENST00000564228 MSX2P35548 267 aaPredicted RBP11.12□□□□□ -0.63
TCF4-222ENST00000564228 GARSP41250 739 aaKnown RBP11.12□□□□□ -0.63
TCF4-222ENST00000564228 CD300CQ08708 224 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 INCA1Q0VD86 236 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 TRAF2Q12933 501 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 KCNT1Q5JUK3 1230 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 ZNF534Q76KX8 674 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 ERMP1Q7Z2K6 904 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 CADM3Q8N126 398 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
TCF4-222ENST00000564228 SLC7A14Q8TBB6 771 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 TMEM176AQ96HP8 235 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 CIB1Q99828 191 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 ARPC5LQ9BPX5 153 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 ADI1Q9BV57 179 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 NDEL1Q9GZM8 345 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 ELOVL4Q9GZR5 314 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 NANOGQ9H9S0 305 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 MOV10Q9HCE1 1003 aaKnown RBP11.12□□□□□ -0.63
TCF4-222ENST00000564228 SMOXQ9NWM0 555 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 GDAP2Q9NXN4 497 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 TMEM216Q9P0N5 145 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 DKK3Q9UBP4 350 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 TCAF1Q9Y4C2 921 aa11.12□□□□□ -0.63
TCF4-222ENST00000564228 TCAF2A6NFQ2 919 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 TBKBP1A7MCY6 615 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 CLDN25C9JDP6 229 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 F8W810 466 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 RGS13O14921 159 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 TRIM24O15164 1050 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 KCNN4O15554 427 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 HCRTO43612 131 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 TRUB2O95900 331 aaKnown RBP11.11□□□□□ -0.63
TCF4-222ENST00000564228 APRTP07741 180 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 KRT3P12035 628 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 TGM2P21980 687 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 FGFR3P22607 806 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 RFC1P35251 1148 aaPredicted RBP11.11□□□□□ -0.63
TCF4-222ENST00000564228 OR1G1P47890 313 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 KPNA1P52294 538 aaPredicted RBP11.11□□□□□ -0.63
TCF4-222ENST00000564228 NRLP54845 237 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 PSME3P61289 254 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 PRKCQQ04759 706 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 SLC36A3Q495N2 470 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 C6orf183Q5T699 404 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 SEL1L3Q68CR1 1132 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 ABRAXAS1Q6UWZ7 409 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 ITIH5Q86UX2 942 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 NPAS4Q8IUM7 802 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 C7orf61Q8IZ16 206 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 RNF148Q8N7C7 305 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 TFAP2BQ92481 460 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 SENP8Q96LD8 212 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 HEXIM2Q96MH2 286 aaKnown RBP11.11□□□□□ -0.63
TCF4-222ENST00000564228 CASD1Q96PB1 797 aa11.11□□□□□ -0.63
TCF4-222ENST00000564228 NT5C1AQ9BXI3 368 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms