RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CDC20Q12834 499 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 MTM1Q13496 603 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 GSE1Q14687 1217 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 LRRC14Q15048 493 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 ISM2Q6H9L7 571 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 IRF2BP1Q8IU81 584 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 C9orf43Q8TAL5 461 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-204ENST00000563739 ABHD17AQ96GS6 310 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 SLC45A3Q96JT2 553 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 EXOC2Q96KP1 924 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 TTYH3Q9C0H2 523 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 TMEM248Q9NWD8 314 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 OCIAD1Q9NX40 245 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 RRN3Q9NYV6 651 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 PLEKHB1Q9UF11 243 aaPredicted RBP10.43□□□□□ -0.74
SF3B3-204ENST00000563739 SEPT3Q9UH03 358 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 PILRAQ9UKJ1 303 aa10.43□□□□□ -0.74
SF3B3-204ENST00000563739 HGSO14964 777 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-204ENST00000563739 RAD1O60671 282 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 LRIG2O94898 1065 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 CPNE6O95741 557 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 FGF1P05230 155 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 FURINP09958 794 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 CTSEP14091 401 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 F8A1P23610 371 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 TRIM23P36406 574 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 MAPKAPK2P49137 400 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 LIG3P49916 1009 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 BLKP51451 505 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 LIMK2P53671 638 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 RNASE9P60153 205 aaKnown RBP10.42□□□□□ -0.74
SF3B3-204ENST00000563739 SNRPD1P62314 119 aaKnown RBP10.42□□□□□ -0.74
SF3B3-204ENST00000563739 NCAPHQ15003 741 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 CYTH1Q15438 398 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 MAP9Q49MG5 647 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 LRRC31Q6UY01 552 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 TTC7BQ86TV6 843 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 UNC5BQ8IZJ1 945 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 RYBPQ8N488 228 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-204ENST00000563739 EMC1Q8N766 993 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 ZSCAN1Q8NBB4 408 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 FAM46DQ8NEK8 389 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 GPBAR1Q8TDU6 330 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 ART4Q93070 314 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 ARHGEF26Q96DR7 871 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 DHTKD1Q96HY7 919 aaPredicted RBP10.42□□□□□ -0.74
SF3B3-204ENST00000563739 TAAR9Q96RI9 348 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 ANP32EQ9BTT0 268 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 PDFQ9HBH1 243 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 RMND1Q9NWS8 449 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 DNAI1Q9UI46 699 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 DOLKQ9UPQ8 538 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 CTNND2Q9UQB3 1225 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 TP53TG5Q9Y2B4 290 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 PAXBP1Q9Y5B6 917 aa10.42□□□□□ -0.74
SF3B3-204ENST00000563739 RP1L1Q8IWN7 2480 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-204ENST00000563739 PCSK5Q92824 1860 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 TMEM110-MUSTN1A8MSY1 372 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 PPM1DO15297 605 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 KDELR3O43731 214 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 PRKAR1AP10644 381 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 RHOQP17081 205 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 MPSTP25325 297 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 MLLT10P55197 1068 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 STX17P56962 302 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 C15orf59Q2T9L4 293 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-204ENST00000563739 AMZ1Q400G9 498 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 FAM102AQ5T9C2 384 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-204ENST00000563739 NKAIN2Q5VXU1 208 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 CAPRIN2Q6IMN6 1127 aaKnown RBP10.41□□□□□ -0.74
SF3B3-204ENST00000563739 KLHL10Q6JEL2 608 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 ENOSF1Q7L5Y1 443 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 TAF8Q7Z7C8 310 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 CACNA2D3Q8IZS8 1091 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 NAGSQ8N159 534 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 CCDC185Q8N715 623 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 OR56A4Q8NGH8 313 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 NELFBQ8WX92 580 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 SCG3Q8WXD2 468 aaKnown RBP10.41□□□□□ -0.74
SF3B3-204ENST00000563739 RTP4Q96DX8 246 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 GDAP1L1Q96MZ0 367 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 DDA1Q9BW61 102 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 MAGEH1Q9H213 219 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 PDP2Q9P2J9 529 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 APEX2Q9UBZ4 518 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 STAP1Q9ULZ2 295 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 PCDHB11Q9Y5F2 797 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 ATP6V1DQ9Y5K8 247 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 MRPS18BQ9Y676 258 aaKnown RBP10.41□□□□□ -0.74
SF3B3-204ENST00000563739 CSMD2Q7Z408 3487 aa10.41□□□□□ -0.74
SF3B3-204ENST00000563739 SETD2Q9BYW2 2564 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-204ENST00000563739 IGHV1OR21-1A0A087WYE8 117 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 PRSS38A1L453 326 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 PRR19A6NJB7 356 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 ZNF891A8MT65 544 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-204ENST00000563739 FOXN3O00409 490 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-204ENST00000563739 PSMA7O14818 248 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 SEMA7AO75326 666 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 DLGAP3O95886 979 aa10.4□□□□□ -0.74
SF3B3-204ENST00000563739 TNFP01375 233 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms