RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 TMEM255BQ8WV15 326 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 RND1Q92730 232 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 TBC1D20Q96BZ9 403 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 PGLYRP2Q96PD5 576 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 EYA3Q99504 573 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 MXRA8Q9BRK3 442 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 PHF7Q9BWX1 381 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 TAOK3Q9H2K8 898 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 PTPRHQ9HD43 1115 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 DDX4Q9NQI0 724 aaKnown RBP3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 SMYD2Q9NRG4 433 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 SNTG1Q9NSN8 517 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 C1RLQ9NZP8 487 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 PEMTQ9UBM1 199 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 ZNF711Q9Y462 761 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 CGNL1Q0VF96 1302 aa3.32□□□□□ -1.88
HMGB1P33-201ENST00000563485 GREB1LQ9C091 1923 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 ATXN2Q99700 1313 aaKnown RBP3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 P2RY10O00398 339 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 NBNO60934 754 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 TIPRLO75663 272 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 RFPL2O75678 378 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 MTA2O94776 668 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 PAK4O96013 591 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 SRCP12931 536 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 GPTP24298 496 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 STX2P32856 288 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 GLIPR1P48060 266 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 PHEXP78562 749 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 SLC20A2Q08357 652 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 DMP1Q13316 513 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 ITGADQ13349 1161 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 SLC12A1Q13621 1099 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 PMS2CLQ68D20 193 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 CCNI2Q6ZMN8 369 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 ADGRG6Q86SQ4 1221 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 SLC9B2Q86UD5 537 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 GPAT4Q86UL3 456 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 RUFY2Q8WXA3 655 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 CCT6BQ92526 530 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 TTC14Q96N46 770 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 SIN3AQ96ST3 1273 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 REEP2Q9BRK0 252 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 HAUS8Q9BT25 410 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 ZFP57Q9NU63 452 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 BABAM1Q9NWV8 329 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 TINAGQ9UJW2 476 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 CARD8Q9Y2G2 431 aa3.31□□□□□ -1.88
HMGB1P33-201ENST00000563485 TAF1P21675 1872 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 FAM172BPA6NC97 362 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 TSPAN3O60637 253 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 CFC1BP0CG36 223 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 CFC1P0CG37 223 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 CD58P19256 250 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 MCM3P25205 808 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 EIF2S3P41091 472 aaKnown RBP3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 CRIP2P52943 208 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 ARL4CP56559 192 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 RELQ04864 619 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 GRIK3Q13003 919 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 NEDD9Q14511 834 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 FBXO47Q5MNV8 452 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 CEP85LQ5SZL2 805 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 SERTAD4-AS1Q5TG53 156 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 ANKRD54Q6NXT1 300 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 FAM122CQ6P4D5 195 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 MTSS1LQ765P7 747 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 TRMT1LQ7Z2T5 733 aaKnown RBP3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 FOXRED2Q8IWF2 684 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 ODF3L1Q8IXM7 274 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 PLD5Q8N7P1 536 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 SCCPDHQ8NBX0 429 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 USP13Q92995 863 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 ELP4Q96EB1 424 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 WBP1Q96G27 269 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 CSTL1Q9H114 145 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 TTYH1Q9H313 450 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 ESRP2Q9H6T0 727 aaKnown RBP3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 C17orf75Q9HAS0 396 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 CNGB3Q9NQW8 809 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 IL1RAPL1Q9NZN1 696 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 KIAA1456Q9P272 454 aa3.3□□□□□ -1.88
HMGB1P33-201ENST00000563485 C16orf97H3BN30 126 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 BCAT2O15382 392 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 FGF17O60258 216 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 SLC22A3O75751 556 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 ATP1A1P05023 1023 aaKnown RBP3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 CYC1P08574 325 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 CETPP11597 493 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 HLA-DOBP13765 273 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 ETFAP13804 333 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 ANOS1P23352 680 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 MARK3P27448 753 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 EFNA5P52803 228 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 TDGQ13569 410 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 EFR3AQ14156 821 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 VEPH1Q14D04 833 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 SYT16Q17RD7 645 aa3.29□□□□□ -1.88
HMGB1P33-201ENST00000563485 ACCSLQ4AC99 568 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms