RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 TTLL5Q6EMB2 1281 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 MTFR2Q6P444 385 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 CYP26C1Q6V0L0 522 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 RSRC2Q7L4I2 434 aaKnown RBP5.23□□□□□ -1.57
LINC00254-201ENST00000563416 SYT13Q7L8C5 426 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 ATG9AQ7Z3C6 839 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 MAATS1Q7Z4T9 603 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 FTSJ3Q8IY81 847 aaKnown RBP5.23□□□□□ -1.57
LINC00254-201ENST00000563416 VPS52Q8N1B4 723 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 SLC25A41Q8N5S1 370 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 DPP10Q8N608 796 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 C9orf106Q8NAJ2 232 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 THAP4Q8WY91 577 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 WACQ9BTA9 647 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 COA1Q9GZY4 146 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 CLPBQ9H078 707 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 UNC45AQ9H3U1 944 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 ACTR5Q9H9F9 607 aaPredicted RBP5.23□□□□□ -1.57
LINC00254-201ENST00000563416 IL21RQ9HBE5 538 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 RASSF1Q9NS23 344 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 KIF17Q9P2E2 1029 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 HACL1Q9UJ83 578 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 SLC4A4Q9Y6R1 1079 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 PTPRFP10586 1907 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 MYO3BQ8WXR4 1341 aa5.23□□□□□ -1.57
LINC00254-201ENST00000563416 NAV1Q8NEY1 1877 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 COL1A1P02452 1464 aaPredicted RBP5.22□□□□□ -1.57
LINC00254-201ENST00000563416 NPIPB13A6NJU9 1138 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 NPIPB5A8MRT5 1133 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 NPIPB4C9JG80 1138 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 SNAP23O00161 211 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 RNASEH2AO75792 299 aaKnown RBP5.22□□□□□ -1.57
LINC00254-201ENST00000563416 FGF2P09038 288 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 KLRC2P26717 231 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 PNPLA4P41247 253 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 EPS15P42566 896 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 RPS6KA3P51812 740 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 PRKAA2P54646 552 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 FOXG1P55316 489 aaPredicted RBP5.22□□□□□ -1.57
LINC00254-201ENST00000563416 KCTD2Q14681 263 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 MVPQ14764 893 aaKnown RBP5.22□□□□□ -1.57
LINC00254-201ENST00000563416 ADCK5Q3MIX3 580 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 RUNDC3AQ59EK9 446 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 JMJD6Q6NYC1 403 aaPredicted RBP5.22□□□□□ -1.57
LINC00254-201ENST00000563416 PARM1Q6UWI2 310 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 USP50Q70EL3 339 aaPredicted RBP5.22□□□□□ -1.57
LINC00254-201ENST00000563416 CAMK1DQ8IU85 385 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 ITPRIPQ8IWB1 547 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 SCN4BQ8IWT1 228 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 AGBL3Q8NEM8 1001 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 USP13Q92995 863 aaPredicted RBP5.22□□□□□ -1.57
LINC00254-201ENST00000563416 FAM167BQ9BTA0 163 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 IFT27Q9BW83 186 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 ZNF304Q9HCX3 659 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 CD209Q9NNX6 404 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 PNRC2Q9NPJ4 139 aaKnown RBP5.22□□□□□ -1.57
LINC00254-201ENST00000563416 SLC22A11Q9NSA0 550 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 TBC1D14Q9P2M4 693 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 NRBP1Q9UHY1 535 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 RCE1Q9Y256 329 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 SIPA1L1O43166 1804 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 FAM205AQ6ZU69 1335 aa5.22□□□□□ -1.57
LINC00254-201ENST00000563416 PHIPQ8WWQ0 1821 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 DDX60LQ5H9U9 1706 aaKnown RBP5.21□□□□□ -1.58
LINC00254-201ENST00000563416 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.21□□□□□ -1.58
LINC00254-201ENST00000563416 TCRBV7S3A2A0A539 114 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 SYN3O14994 580 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 IRAK2O43187 625 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 KCNAB3O43448 404 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 FAM155BO75949 473 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 CYP21A2P08686 494 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 DHRS4L1P0CG22 281 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 CYP4B1P13584 511 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 TNNT1P13805 278 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 ADD2P35612 726 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 IL15P40933 162 aaPredicted RBP5.21□□□□□ -1.58
LINC00254-201ENST00000563416 MMP14P50281 582 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 FKBP1AP62942 108 aaKnown RBP5.21□□□□□ -1.58
LINC00254-201ENST00000563416 ZBTB16Q05516 673 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 ANKRD45Q5TZF3 282 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 NUGGCQ68CJ6 796 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 ZNF280DQ6N043 979 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 C9orf47Q6ZRZ4 202 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 RASGRP2Q7LDG7 609 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 GALNT7Q86SF2 657 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 TMEM217Q8N7C4 229 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 PDILTQ8N807 584 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 TDRD7Q8NHU6 1098 aaKnown RBP5.21□□□□□ -1.58
LINC00254-201ENST00000563416 SNRNP27Q8WVK2 155 aaKnown RBP5.21□□□□□ -1.58
LINC00254-201ENST00000563416 TBC1D20Q96BZ9 403 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 FAM84BQ96KN1 310 aaPredicted RBP5.21□□□□□ -1.58
LINC00254-201ENST00000563416 EIF2AK1Q9BQI3 630 aaKnown RBP5.21□□□□□ -1.58
LINC00254-201ENST00000563416 CADM1Q9BY67 442 aaKnown RBP5.21□□□□□ -1.58
LINC00254-201ENST00000563416 RBM38Q9H0Z9 239 aaKnown RBP5.21□□□□□ -1.58
LINC00254-201ENST00000563416 Q9N2J8 555 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 TMEM248Q9NWD8 314 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 KLQ9UEF7 1012 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 CNOT7Q9UIV1 285 aaKnown RBP5.21□□□□□ -1.58
LINC00254-201ENST00000563416 DDX19BQ9UMR2 479 aa5.21□□□□□ -1.58
LINC00254-201ENST00000563416 PA2G4Q9UQ80 394 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms