RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 RPIAP49247 311 aa16.93■□□□□ 0.3
CLK3-210ENST00000563112 ADKP55263 362 aaKnown RBP16.93■□□□□ 0.3
CLK3-210ENST00000563112 INSM1Q01101 510 aaPredicted RBP16.93■□□□□ 0.3
CLK3-210ENST00000563112 MMRN1Q13201 1228 aa16.93■□□□□ 0.3
CLK3-210ENST00000563112 DPYSL3Q14195 570 aa16.93■□□□□ 0.3
CLK3-210ENST00000563112 INPP5AQ14642 412 aa16.93■□□□□ 0.3
CLK3-210ENST00000563112 NFATC4Q14934 902 aa16.93■□□□□ 0.3
CLK3-210ENST00000563112 DEFB133Q30KQ1 61 aa16.93■□□□□ 0.3
CLK3-210ENST00000563112 LIPIQ6XZB0 460 aa16.93■□□□□ 0.3
CLK3-210ENST00000563112 FSTL5Q8N475 847 aaPredicted RBP16.93■□□□□ 0.3
CLK3-210ENST00000563112 PACSIN1Q9BY11 444 aa16.93■□□□□ 0.3
CLK3-210ENST00000563112 HAUS2Q9NVX0 235 aa16.93■□□□□ 0.3
CLK3-210ENST00000563112 DOLKQ9UPQ8 538 aa16.93■□□□□ 0.3
CLK3-210ENST00000563112 PCDHGC4Q9Y5F7 938 aa16.93■□□□□ 0.3
CLK3-210ENST00000563112 SHROOM3Q8TF72 1996 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 TTC24A2A3L6 582 aaPredicted RBP16.92■□□□□ 0.3
CLK3-210ENST00000563112 CPED1A4D0V7 1026 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 HTRA2O43464 458 aaPredicted RBP16.92■□□□□ 0.3
CLK3-210ENST00000563112 RECQL5O94762 991 aaPredicted RBP16.92■□□□□ 0.3
CLK3-210ENST00000563112 RASGRP1O95267 797 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 MT-CO3P00414 261 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 CPP00450 1065 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 CD48P09326 243 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 CYP2A6P11509 494 aaPredicted RBP16.92■□□□□ 0.3
CLK3-210ENST00000563112 KRT10P13645 584 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 CTSEP14091 401 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 CR2P20023 1033 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 ARSEP51690 589 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 ITKQ08881 620 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 RALGDSQ12967 914 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 C1orf61Q13536 156 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 ACOX1Q15067 660 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 PAFAH1B3Q15102 231 aaKnown RBP16.92■□□□□ 0.3
CLK3-210ENST00000563112 ELOCQ15369 112 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 ASTE1Q2TB18 679 aaPredicted RBP16.92■□□□□ 0.3
CLK3-210ENST00000563112 ATP13A4Q4VNC1 1196 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 ANKRD20A8PQ5CZ79 823 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 TIGD7Q6NT04 549 aaPredicted RBP16.92■□□□□ 0.3
CLK3-210ENST00000563112 ENPP7Q6UWV6 458 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 RD3Q7Z3Z2 195 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 HID1Q8IV36 788 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 PGBD5Q8N414 524 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 SCG3Q8WXD2 468 aaKnown RBP16.92■□□□□ 0.3
CLK3-210ENST00000563112 SPOCK2Q92563 424 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 MGME1Q9BQP7 344 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 ZNF670Q9BS34 389 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 ANP32EQ9BTT0 268 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 NRSN2Q9GZP1 204 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 TCEAL2Q9H3H9 227 aaPredicted RBP16.92■□□□□ 0.3
CLK3-210ENST00000563112 NOD2Q9HC29 1040 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 ABHD10Q9NUJ1 306 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 KCTD5Q9NXV2 234 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 PHTF1Q9UMS5 762 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 AK5Q9Y6K8 562 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 ZFYVE26Q68DK2 2539 aa16.92■□□□□ 0.3
CLK3-210ENST00000563112 URB1O60287 2271 aaKnown RBP16.91■□□□□ 0.3
CLK3-210ENST00000563112 A8MX80 341 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 LMO7DNF2Z398 122 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 CACNB4O00305 520 aaPredicted RBP16.91■□□□□ 0.3
CLK3-210ENST00000563112 OPA1O60313 960 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 MFAP3LO75121 409 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 GCATO75600 419 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 ALPIP09923 528 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 MYF5P13349 255 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 KELP23276 732 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 MAN1A1P33908 653 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 GARSP41250 739 aaKnown RBP16.91■□□□□ 0.3
CLK3-210ENST00000563112 HK3P52790 923 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 MAXP61244 160 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 MESDQ14696 234 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 NR0B2Q15466 257 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 IFI16Q16666 785 aaKnown RBP16.91■□□□□ 0.3
CLK3-210ENST00000563112 ESRP1Q6NXG1 681 aaKnown RBP16.91■□□□□ 0.3
CLK3-210ENST00000563112 CNGA4Q8IV77 575 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 NDUFAF2Q8N183 169 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 SDR16C5Q8N3Y7 309 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 DCBLD1Q8N8Z6 715 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 PCDH19Q8TAB3 1148 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 IFI44Q8TCB0 444 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 MAPK15Q8TD08 544 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 TSACCQ96A04 125 aaPredicted RBP16.91■□□□□ 0.3
CLK3-210ENST00000563112 NSMCE3Q96MG7 304 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 WDR92Q96MX6 357 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 LRRC61Q9BV99 259 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 NHEJ1Q9H9Q4 299 aaPredicted RBP16.91■□□□□ 0.3
CLK3-210ENST00000563112 NT5MQ9NPB1 228 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 B4GALT6Q9UBX8 382 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 KLQ9UEF7 1012 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 RAXQ9Y2V3 346 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 OR1A2Q9Y585 309 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 MYLKQ15746 1914 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 FREM2Q5SZK8 3169 aa16.91■□□□□ 0.3
CLK3-210ENST00000563112 LY6G6EA0A0G2JKS1 128 aa16.9■□□□□ 0.3
CLK3-210ENST00000563112 MATN3O15232 486 aa16.9■□□□□ 0.3
CLK3-210ENST00000563112 YY2O15391 372 aa16.9■□□□□ 0.3
CLK3-210ENST00000563112 MFSD11O43934 449 aa16.9■□□□□ 0.3
CLK3-210ENST00000563112 TNFP01375 233 aa16.9■□□□□ 0.3
CLK3-210ENST00000563112 TSHRP16473 764 aa16.9■□□□□ 0.3
CLK3-210ENST00000563112 MX2P20592 715 aa16.9■□□□□ 0.3
CLK3-210ENST00000563112 CES1P23141 567 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms