RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 NAF1Q96HR8 494 aaKnown RBP11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 PSKH2Q96QS6 385 aa11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 EIF3CQ99613 913 aaKnown RBP11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 IL12RB2Q99665 862 aa11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 C1QTNF7Q9BXJ2 289 aa11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 SLC13A1Q9BZW2 595 aa11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 PCDH18Q9HCL0 1135 aa11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 FGF22Q9HCT0 170 aa11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 MRPL40Q9NQ50 206 aaKnown RBP11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 SIRPGQ9P1W8 387 aa11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 B4GALT6Q9UBX8 382 aa11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 SALL4Q9UJQ4 1053 aa11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 NENFQ9UMX5 172 aa11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 PCDHGC4Q9Y5F7 938 aa11.11□□□□□ -0.63
KLHDC4-209ENST00000562872 A0A1W2PQJ5 194 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 TPP1O14773 563 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 LZTS3O60299 673 aaPredicted RBP11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 MAFKO60675 156 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 MAP3K6O95382 1288 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 CYP1A2P05177 515 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 ANXA6P08133 673 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 LHCGRP22888 699 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 IL4RP24394 825 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 DUSP3P51452 185 aaPredicted RBP11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 SUOXP51687 545 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 UBASH3AP57075 661 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 SRP54P61011 504 aaKnown RBP11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 BCL2L1Q07817 233 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 TRAF2Q12933 501 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 PTK2BQ14289 1009 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 GRM3Q14832 879 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 AGERQ15109 404 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 CNGA3Q16281 694 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 ATP13A4Q4VNC1 1196 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 ERAP2Q6P179 960 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 TMCO3Q6UWJ1 677 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 DPPA4Q7L190 304 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 PTCD2Q8WV60 388 aaKnown RBP11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 BTN2A2Q8WVV5 523 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 TRIM11Q96F44 468 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 HIC2Q96JB3 615 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 TBATAQ96M53 351 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 DEPDC7Q96QD5 511 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 NUP85Q9BW27 656 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 LGR4Q9BXB1 951 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 ABCG4Q9H172 646 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 USP29Q9HBJ7 922 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 NOD2Q9HC29 1040 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 MRPL47Q9HD33 250 aaKnown RBP11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 ASCL3Q9NQ33 180 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 IFNKQ9P0W0 207 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 GULP1Q9UBP9 304 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 KLQ9UEF7 1012 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 SEPT3Q9UH03 358 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 ANAPC7Q9UJX3 599 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 ENTPD2Q9Y5L3 495 aa11.1□□□□□ -0.63
KLHDC4-209ENST00000562872 PTPRQQ9UMZ3 2332 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 RP1P56715 2156 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 HTRA2O43464 458 aaPredicted RBP11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 MFSD11O43934 449 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 RASGRP1O95267 797 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 SERPING1P05155 500 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 ELFN1P0C7U0 828 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 ARL4AP40617 200 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 PEX5P50542 639 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 ARSEP51690 589 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 AP1S1P61966 158 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 ZBED6P86452 979 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 TLE3Q04726 772 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 NSUN2Q08J23 767 aaKnown RBP eCLIP11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 MTM1Q13496 603 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 RFTN1Q14699 578 aaPredicted RBP11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 C3orf38Q5JPI3 329 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 RFLNAQ6ZTI6 216 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 B3GNT8Q7Z7M8 397 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 TSPAN33Q86UF1 283 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 SPACA3Q8IXA5 215 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 NIPA2Q8N8Q9 360 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 CCL4L1Q8NHW4 92 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 TEKT4Q8WW24 435 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 SYN2Q92777 582 aaPredicted RBP11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 FGF11Q92914 225 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 CCDC74AQ96AQ1 378 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 PRR11Q96HE9 360 aaPredicted RBP11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 COQ10AQ96MF6 247 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 WDR92Q96MX6 357 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 CCDC3Q9BQI4 270 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 MGME1Q9BQP7 344 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 PACSIN1Q9BY11 444 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 PRORYQ9H606 182 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 DONSONQ9NYP3 566 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 PADI4Q9UM07 663 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 CAPN11Q9UMQ6 739 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 SATB2Q9UPW6 733 aa11.09□□□□□ -0.63
KLHDC4-209ENST00000562872 NPIPB15A6NHN6 443 aaPredicted RBP11.08□□□□□ -0.64
KLHDC4-209ENST00000562872 TOR1BO14657 336 aa11.08□□□□□ -0.64
KLHDC4-209ENST00000562872 FUCA1P04066 466 aa11.08□□□□□ -0.64
KLHDC4-209ENST00000562872 PRB1P04280 392 aa11.08□□□□□ -0.64
KLHDC4-209ENST00000562872 CASP14P31944 242 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms