RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TYW3Q6IPR3 259 aaKnown RBP3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 CES5AQ6NT32 575 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 SLC22A25Q6T423 547 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 MOB3CQ70IA8 216 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 RRM2BQ7LG56 351 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 TADA2BQ86TJ2 420 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 TBC1D26Q86UD7 250 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 EXOC8Q8IYI6 725 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 WDSUB1Q8N9V3 476 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 C11orf65Q8NCR3 313 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 ZCCHC10Q8TBK6 192 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 PPM1EQ8WY54 764 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 ZC3HAV1LQ96H79 300 aaKnown RBP3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 MYH16Q9H6N6 1097 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 CLK4Q9HAZ1 481 aaKnown RBP3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 KIAA1456Q9P272 454 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 AGO1Q9UL18 857 aaKnown RBP3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 CARD8Q9Y2G2 431 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 ATAD2BQ9ULI0 1458 aa3.21□□□□□ -1.9
HDGFL3-202ENST00000562702 SNED1Q8TER0 1413 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 SMARCA4P51532 1647 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 LINC01553A4QN01 128 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 TSPAN4O14817 238 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 MTA2O94776 668 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 HNRNPA1P09651 372 aaKnown RBP eCLIP3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 ZNF12P17014 697 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 AMD1P17707 334 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 XBP1P17861 261 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 SRD5A1P18405 259 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 FMO4P31512 558 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 ARL1P40616 181 aaPredicted RBP3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 MXI1P50539 228 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 NR1H2P55055 460 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 RPP30P78346 268 aaKnown RBP3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 FOXD4Q12950 439 aaPredicted RBP3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 TDGQ13569 410 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 ARHGEF6Q15052 776 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 TAF11Q15544 211 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 ESCO2Q56NI9 601 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 TMEM81Q6P7N7 255 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 MYPOPQ86VE0 399 aaPredicted RBP3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 TMTC1Q8IUR5 882 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 POC1AQ8NBT0 407 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 GJC3Q8NFK1 279 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 TRIB2Q92519 343 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 FBXO17Q96EF6 278 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 PKP4Q99569 1192 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 SLC25A33Q9BSK2 321 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 FUZQ9BT04 418 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 CYSLTR2Q9NS75 346 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 SNTG1Q9NSN8 517 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 PPP1R14DQ9NXH3 145 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 SAGE1Q9NXZ1 904 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 OR6C3Q9NZP0 311 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 SLC13A4Q9UKG4 626 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 GJD2Q9UKL4 321 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 SMARCA2P51531 1590 aa3.2□□□□□ -1.9
HDGFL3-202ENST00000562702 TEX13CA0A0J9YWL9 993 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 A0A0U1RQF3 1178 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 DYTNA2CJ06 578 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 PLEKHD1A6NEE1 506 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 HSPB2A8KAH6 182 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 KLRF2D3W0D1 207 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 TNPO2O14787 897 aaKnown RBP3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 TIMM23O14925 209 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 NPHP1O15259 732 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 RGS11O94810 467 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 NDUFB4O95168 129 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 VNN2O95498 520 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 CH25HO95992 272 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 PAK4O96013 591 aaPredicted RBP3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 URODP06132 367 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 GALTP07902 379 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 IRF1P10914 325 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 KRT5P13647 590 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 CD58P19256 250 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 GPTP24298 496 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 CHATP28329 748 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 ITGADQ13349 1161 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 VEPH1Q14D04 833 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 HSPB2Q16082 182 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 GPAT4Q86UL3 456 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 KIAA2013Q8IYS2 634 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 PARP16Q8N5Y8 322 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 AADATQ8N5Z0 425 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 PLD5Q8N7P1 536 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 HVCN1Q96D96 273 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 ADGRG7Q96K78 797 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 LRFN5Q96NI6 719 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 BBS4Q96RK4 519 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 SIN3AQ96ST3 1273 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 NUF2Q9BZD4 464 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 TTYH1Q9H313 450 aaPredicted RBP3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 VEZTQ9HBM0 779 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 WASH6PQ9NQA3 447 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 SMYD2Q9NRG4 433 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 OCIAD1Q9NX40 245 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 GGA3Q9NZ52 723 aa3.19□□□□□ -1.9
HDGFL3-202ENST00000562702 SLC25A10Q9UBX3 287 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms