RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 KLHL5Q96PQ7 755 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 TRMOQ9BU70 441 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 GPR62Q9BZJ7 368 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 TMEM248Q9NWD8 314 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 GRHL1Q9NZI5 618 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 SORCS3Q9UPU3 1222 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 PCDHB9Q9Y5E1 797 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 PCDHGA4Q9Y5G9 962 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 RAI2Q9Y5P3 530 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 C1orf232A0A0U1RR37 186 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 FAM155AB1AL88 458 aaPredicted RBP7.59□□□□□ -1.19
TCF4-216ENST00000562680 CACHD1Q5VU97 1274 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 FBXL22Q6P050 247 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 TTC7BQ86TV6 843 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 CKAP2Q8WWK9 683 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 EFHD2Q96C19 240 aaPredicted RBP7.59□□□□□ -1.19
TCF4-216ENST00000562680 NSL1Q96IY1 281 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 COPS8Q99627 209 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 LRRC4CQ9HCJ2 640 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 MAPRE3Q9UPY8 281 aa7.59□□□□□ -1.19
TCF4-216ENST00000562680 NDUFB5O43674 189 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 FSBPO95073 299 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 CTSAP10619 480 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 PCSK2P16519 638 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 OGNP20774 298 aaKnown RBP7.59□□□□□ -1.2
TCF4-216ENST00000562680 KRT20P35900 424 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 ATP6V1E1P36543 226 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 ST13P50502 369 aaKnown RBP7.59□□□□□ -1.2
TCF4-216ENST00000562680 WNT7BP56706 349 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 RPL26P61254 145 aaKnown RBP7.59□□□□□ -1.2
TCF4-216ENST00000562680 IFI35P80217 286 aaPredicted RBP7.59□□□□□ -1.2
TCF4-216ENST00000562680 CAMK2GQ13555 558 aaPredicted RBP7.59□□□□□ -1.2
TCF4-216ENST00000562680 CLLU1OSQ5K130 101 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 CFAP52Q8N1V2 620 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 DDHD1Q8NEL9 900 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 OR10T2Q8NGX3 314 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 SH3RF2Q8TEC5 729 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 MRPL57Q9BQC6 102 aaKnown RBP7.59□□□□□ -1.2
TCF4-216ENST00000562680 ASPSCR1Q9BZE9 553 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 ZDHHC4Q9NPG8 344 aa7.59□□□□□ -1.2
TCF4-216ENST00000562680 RPL26L1Q9UNX3 145 aaKnown RBP7.59□□□□□ -1.2
TCF4-216ENST00000562680 TMEM114B3SHH9 223 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 GOLGA8TH3BQL2 631 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 THRAP10827 490 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 NAT2P11245 290 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 KELP23276 732 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 SERPINB5P36952 375 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 KCNK10P57789 538 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 FLOT2Q14254 428 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 DCAF12L1Q5VU92 463 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 PM20D1Q6GTS8 502 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 RFWD3Q6PCD5 774 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 TXNDC11Q6PKC3 985 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 HFE2Q6ZVN8 426 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 RBM23Q86U06 439 aaKnown RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 ZIC5Q96T25 663 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 LPIN3Q9BQK8 851 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 CDH19Q9H159 772 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 MARCOQ9UEW3 520 aaPredicted RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 DNAJC16Q9Y2G8 782 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 MRPS17Q9Y2R5 130 aaKnown RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 GRK3P35626 688 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 ALDH18A1P54886 795 aaKnown RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 ADARP55265 1226 aaKnown RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 MAXP61244 160 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 FAM189BP81408 668 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 DAB2P98082 770 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 DSG1Q02413 1049 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 TGM3Q08188 693 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 C1orf146Q5VVC0 180 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 MARK2Q7KZI7 788 aaKnown RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 TCEAL8Q8IYN2 117 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 SLC39A11Q8N1S5 342 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 DCAF4L2Q8NA75 395 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 OR7D4Q8NG98 312 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 RFWD2Q8NHY2 731 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 POF1BQ8WVV4 589 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 ARNTL2Q8WYA1 636 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 REPS1Q96D71 796 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 OMDQ99983 421 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 YIPF2Q9BWQ6 316 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 FAM192AQ9GZU8 254 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 R3HDMLQ9H3Y0 253 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 CASS4Q9NQ75 786 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 TMPRSS4Q9NRS4 437 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 CACNG4Q9UBN1 327 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 HS3ST4Q9Y661 456 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 E2F8A0AVK6 867 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 GNGT2O14610 69 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 PRMT5O14744 637 aaPredicted RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 CD3EAPO15446 510 aaKnown RBP7.58□□□□□ -1.2
TCF4-216ENST00000562680 ZBTB14O43829 449 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 EDN1P05305 212 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 BMPR1AP36894 532 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 DGKGP49619 791 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 MGAT3Q09327 533 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 RASA2Q15283 850 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 SPDYAQ5MJ70 313 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 CES3Q6UWW8 571 aa7.58□□□□□ -1.2
TCF4-216ENST00000562680 RNF19BQ6ZMZ0 732 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms