RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 PDXPQ96GD0 296 aa19.49■□□□□ 0.71
CDH11-203ENST00000562325 EIF3CQ99613 913 aaKnown RBP19.49■□□□□ 0.71
CDH11-203ENST00000562325 PDFQ9HBH1 243 aa19.49■□□□□ 0.71
CDH11-203ENST00000562325 KCTD5Q9NXV2 234 aa19.49■□□□□ 0.71
CDH11-203ENST00000562325 AKAP7Q9P0M2 348 aaPredicted RBP19.49■□□□□ 0.71
CDH11-203ENST00000562325 COQ6Q9Y2Z9 468 aa19.49■□□□□ 0.71
CDH11-203ENST00000562325 PCDHGA4Q9Y5G9 962 aa19.49■□□□□ 0.71
CDH11-203ENST00000562325 UNC13CQ8NB66 2214 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 SIGLEC16A6NMB1 481 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 PES1O00541 588 aaKnown RBP19.48■□□□□ 0.71
CDH11-203ENST00000562325 PIGNO95427 931 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 CHRNB2P17787 502 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 SERPINA4P29622 427 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 SOX5P35711 763 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 ZNF143P52747 638 aaPredicted RBP19.48■□□□□ 0.71
CDH11-203ENST00000562325 NDST2P52849 883 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 POLR2LP62875 67 aaKnown RBP19.48■□□□□ 0.71
CDH11-203ENST00000562325 CYTH1Q15438 398 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 TGIF1Q15583 401 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 TCP11X2Q5H9J9 407 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 TMEM164Q5U3C3 297 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 KIAA1524Q8TCG1 905 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 SLC20A1Q8WUM9 679 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 SELENOOQ9BVL4 669 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 KLC2Q9H0B6 622 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 GANQ9H2C0 597 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 ATP13A3Q9H7F0 1226 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 ADAM22Q9P0K1 906 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 LRP4O75096 1905 aa19.48■□□□□ 0.71
CDH11-203ENST00000562325 SCN8AQ9UQD0 1980 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 ANKRD62A6NC57 917 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 HGSO14964 777 aaPredicted RBP19.47■□□□□ 0.71
CDH11-203ENST00000562325 INSIG1O15503 277 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 SUV39H1O43463 412 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 HGFP14210 728 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 DESP17661 470 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 STAT1P42224 750 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 JAM2P57087 298 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 ARHGEF7Q14155 803 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 WDR59Q6PJI9 974 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 TAF8Q7Z7C8 310 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 FAM46DQ8NEK8 389 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 SLC30A5Q8TAD4 765 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 EXTL1Q92935 676 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 ECHDC3Q96DC8 303 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 MAGEB5Q9BZ81 275 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 LRRC19Q9H756 370 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 LRIT1Q9P2V4 623 aa19.47■□□□□ 0.71
CDH11-203ENST00000562325 PRAMEF33A0A0G2JMD5 474 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 PRAMEF10O60809 474 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 PRAMEF11O60813 436 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 GFPT2O94808 682 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 CPNE6O95741 557 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 PCCBP05166 539 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 NSUN2Q08J23 767 aaKnown RBP eCLIP19.46■□□□□ 0.71
CDH11-203ENST00000562325 PEX6Q13608 980 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 RFTN1Q14699 578 aaPredicted RBP19.46■□□□□ 0.71
CDH11-203ENST00000562325 NR1D2Q14995 579 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 DPCR1Q3MIW9 517 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 AFMIDQ63HM1 303 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 ZNF438Q7Z4V0 828 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 C17orf82Q86X59 251 aaPredicted RBP19.46■□□□□ 0.71
CDH11-203ENST00000562325 OR1E3Q8WZA6 343 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 FUBP1Q96AE4 644 aaKnown RBP19.46■□□□□ 0.71
CDH11-203ENST00000562325 EXOC2Q96KP1 924 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 ADNPQ9H2P0 1102 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 FGF22Q9HCT0 170 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 FZD10Q9ULW2 581 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 RNF215Q9Y6U7 377 aa19.46■□□□□ 0.71
CDH11-203ENST00000562325 BSNQ9UPA5 3926 aa19.45■□□□□ 0.7
CDH11-203ENST00000562325 TMEM202A6NGA9 273 aa19.45■□□□□ 0.7
CDH11-203ENST00000562325 PPFIA2O75334 1257 aa19.45■□□□□ 0.7
CDH11-203ENST00000562325 RECQL5O94762 991 aaPredicted RBP19.45■□□□□ 0.7
CDH11-203ENST00000562325 ELFN1P0C7U0 828 aa19.45■□□□□ 0.7
CDH11-203ENST00000562325 SPECC1LQ69YQ0 1117 aa19.45■□□□□ 0.7
CDH11-203ENST00000562325 PIM3Q86V86 326 aa19.45■□□□□ 0.7
CDH11-203ENST00000562325 PYROXD2Q8N2H3 581 aa19.45■□□□□ 0.7
CDH11-203ENST00000562325 Q8N9G6 341 aaPredicted RBP19.45■□□□□ 0.7
CDH11-203ENST00000562325 CNPY3Q9BT09 278 aa19.45■□□□□ 0.7
CDH11-203ENST00000562325 DPEP2Q9H4A9 486 aa19.45■□□□□ 0.7
CDH11-203ENST00000562325 WDR26Q9H7D7 661 aa19.45■□□□□ 0.7
CDH11-203ENST00000562325 GEMIN8Q9NWZ8 242 aaKnown RBP19.45■□□□□ 0.7
CDH11-203ENST00000562325 PCDHGA3Q9Y5H0 932 aa19.45■□□□□ 0.7
CDH11-203ENST00000562325 A0A1W2PQ67 120 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 TCRBV5S1A1TA0A578 114 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 ARHGAP42A6NI28 874 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 C9orf172C9J069 976 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 STMND1H3BQB6 276 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 CREB3O43889 395 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 BUB1BO60566 1050 aaPredicted RBP19.44■□□□□ 0.7
CDH11-203ENST00000562325 ITIH1P19827 911 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 GPR3P46089 330 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 B4GALNT1Q00973 533 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 RALGDSQ12967 914 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 TRA2AQ13595 282 aaKnown RBP eCLIP19.44■□□□□ 0.7
CDH11-203ENST00000562325 CLEC16AQ2KHT3 1053 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 LIPIQ6XZB0 460 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 DPPA4Q7L190 304 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 MON1BQ7L1V2 547 aa19.44■□□□□ 0.7
CDH11-203ENST00000562325 CAMK1DQ8IU85 385 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms