RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 OSBPL1AQ9BXW6 950 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 MFSD1Q9H3U5 465 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 ZDHHC6Q9H6R6 413 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 BRD9Q9H8M2 597 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 MAGEE1Q9HCI5 957 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 SLCO3A1Q9UIG8 710 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 PLA2G4CQ9UP65 541 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 NUMBLQ9Y6R0 609 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 COL4A2P08572 1712 aa14.35□□□□□ -0.11
COMMD4-205ENST00000562310 CCDC78A2IDD5 438 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 CAPN8A6NHC0 703 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 TRIM49D1C9J1S8 452 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 ARNTLO00327 626 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 PIAS1O75925 651 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 PIGNO95427 931 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 BRAFP15056 766 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 LPOP22079 712 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-205ENST00000562310 ARNTP27540 789 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 SPRP35270 261 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-205ENST00000562310 GRIA2P42262 883 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 SLC6A11P48066 632 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 SLC18A1P54219 525 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 PTPRNQ16849 979 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 FNDC3BQ53EP0 1204 aaKnown RBP14.34□□□□□ -0.11
COMMD4-205ENST00000562310 TIFABQ6ZNK6 161 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 DPY19L3Q6ZPD9 716 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 GALNT7Q86SF2 657 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 OR13J1Q8NGT2 312 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 OR2A12Q8NGT7 310 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 CSGALNACT1Q8TDX6 532 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 PIH1D2Q8WWB5 315 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 NXPE3Q969Y0 559 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 RBBP8Q99708 897 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 HEPHQ9BQS7 1158 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 SUV39H2Q9H5I1 410 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 UBE2ZQ9H832 354 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-205ENST00000562310 IARS2Q9NSE4 1012 aaKnown RBP14.34□□□□□ -0.11
COMMD4-205ENST00000562310 NLE1Q9NVX2 485 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-205ENST00000562310 SLC2A6Q9UGQ3 507 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 ADAM21Q9UKJ8 722 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 PHTF1Q9UMS5 762 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 ZNF711Q9Y462 761 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 SPO11Q9Y5K1 396 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 SCN8AQ9UQD0 1980 aa14.34□□□□□ -0.11
COMMD4-205ENST00000562310 A0A0J9YYE9 177 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 EDDM13A0A1B0GTR0 161 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 GRXCR2A6NFK2 248 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 TTC34A8MYJ7 566 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 PRRT4C9JH25 899 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 SOX1O00570 391 aaPredicted RBP14.33□□□□□ -0.12
COMMD4-205ENST00000562310 PRPF4O43172 522 aaKnown RBP eCLIP14.33□□□□□ -0.12
COMMD4-205ENST00000562310 UGT1A9O60656 530 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 TRBC1P01850 177 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 APODP05090 189 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 LIMK2P53671 638 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 POLR2LP62875 67 aaKnown RBP14.33□□□□□ -0.12
COMMD4-205ENST00000562310 NEPROQ6NW34 567 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 BRAT1Q6PJG6 821 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 AFTPHQ6ULP2 937 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 GDPD4Q6W3E5 623 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 USP45Q70EL2 814 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 STRA8Q7Z7C7 330 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 TTC30BQ8N4P2 665 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 HCAR2Q8TDS4 363 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 ACMSDQ8TDX5 336 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 SORCS1Q8WY21 1168 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 PTPRN2Q92932 1015 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 DNAJC1Q96KC8 554 aaKnown RBP14.33□□□□□ -0.12
COMMD4-205ENST00000562310 LYSMD1Q96S90 227 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 RHOJQ9H4E5 214 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 UGT1A7Q9HAW7 530 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 UGT1A10Q9HAW8 530 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 UGT1A8Q9HAW9 530 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 NKIRAS1Q9NYS0 192 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 GTSE1Q9NYZ3 720 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 IL1RAPL1Q9NZN1 696 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 PSAT1Q9Y617 370 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 ARL5AQ9Y689 179 aa14.33□□□□□ -0.12
COMMD4-205ENST00000562310 TMEM120BA0PK00 339 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 TSPAN11A1L157 253 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 TBC1D3BA6NDS4 549 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 FAM47DPA6NHR8 397 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 H3BQ06 376 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-205ENST00000562310 NPC1O15118 1278 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 STX7O15400 261 aaKnown RBP14.32□□□□□ -0.12
COMMD4-205ENST00000562310 MBTPS2O43462 519 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 BNIP3LO60238 219 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 KAT7O95251 611 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 PRKCGP05129 697 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 ITGA2BP08514 1039 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 PIRTP0C851 137 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 OGNP20774 298 aaKnown RBP14.32□□□□□ -0.12
COMMD4-205ENST00000562310 CCNFP41002 786 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 POLD2P49005 469 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 ATP1A2P50993 1020 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 GABPB1Q06547 395 aaPredicted RBP14.32□□□□□ -0.12
COMMD4-205ENST00000562310 HNRNPA1L2Q32P51 320 aaKnown RBP14.32□□□□□ -0.12
COMMD4-205ENST00000562310 ZNF470Q6ECI4 717 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 MRNIPQ6NTE8 343 aa14.32□□□□□ -0.12
COMMD4-205ENST00000562310 GPR153Q6NV75 609 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms