RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 CCDC195A0A1B0GUA6 201 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 CCDC162PA2VCL2 907 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 ANKRD66B4E2M5 251 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 RPP40O75818 363 aaKnown RBP16.62■□□□□ 0.25
PKD1-225ENST00000562297 TGDSO95455 350 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 S1PR4O95977 384 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 PENKP01210 267 aaPredicted RBP16.62■□□□□ 0.25
PKD1-225ENST00000562297 NEFHP12036 1026 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 KCNA4P22459 653 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 HLA-FP30511 346 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 RAB10P61026 200 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 TMPRSS15P98073 1019 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 GPM6BQ13491 265 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 CCDC153Q494R4 210 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 LACTB2Q53H82 288 aaPredicted RBP16.62■□□□□ 0.25
PKD1-225ENST00000562297 RBM20Q5T481 1227 aaKnown RBP16.62■□□□□ 0.25
PKD1-225ENST00000562297 ADGRD2Q7Z7M1 963 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 LPCAT1Q8NF37 534 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 GPR150Q8NGU9 434 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 OMDQ99983 421 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 NPHS2Q9NP85 383 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 ABCB8Q9NUT2 735 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 NLE1Q9NVX2 485 aaPredicted RBP16.62■□□□□ 0.25
PKD1-225ENST00000562297 ANKRD6Q9Y2G4 727 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 YBX2Q9Y2T7 364 aaKnown RBP16.62■□□□□ 0.25
PKD1-225ENST00000562297 CAPN7Q9Y6W3 813 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 SZT2Q5T011 3432 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 SCN8AQ9UQD0 1980 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 CYBBP04839 570 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 SAT1P21673 171 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 USP4Q13107 963 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 ZNF460Q14592 562 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 SHHQ15465 462 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 TAF1AQ15573 450 aaPredicted RBP16.62■□□□□ 0.25
PKD1-225ENST00000562297 TTC31Q49AM3 519 aaPredicted RBP16.62■□□□□ 0.25
PKD1-225ENST00000562297 ATG16L1Q676U5 607 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 ASTLQ6HA08 431 aaPredicted RBP16.62■□□□□ 0.25
PKD1-225ENST00000562297 ZCCHC23Q6ZST2 131 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 LDB1Q86U70 411 aaPredicted RBP16.62■□□□□ 0.25
PKD1-225ENST00000562297 LCA5Q86VQ0 697 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 TNS4Q8IZW8 715 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 FITM2Q8N6M3 262 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 OR6Y1Q8NGX8 325 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 VOPP1Q96AW1 172 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 SAMD11Q96NU1 681 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 ADGRE3Q9BY15 652 aa16.62■□□□□ 0.25
PKD1-225ENST00000562297 ZNF395Q9H8N7 513 aaPredicted RBP16.62■□□□□ 0.25
PKD1-225ENST00000562297 CXorf51AA0A1B0GTR3 108 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 G3V2L1 256 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 CRTAMO95727 393 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 GOT2P00505 430 aaKnown RBP16.61■□□□□ 0.25
PKD1-225ENST00000562297 STMN1P16949 149 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 CEBPBP17676 345 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 SLC8A1P32418 973 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 AP1S1P61966 158 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 POU4F1Q01851 419 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 RAPH1Q70E73 1250 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 RBM23Q86U06 439 aaKnown RBP16.61■□□□□ 0.25
PKD1-225ENST00000562297 C10orf107Q8IVU9 208 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 RFWD2Q8NHY2 731 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 GABPB2Q8TAK5 448 aaPredicted RBP16.61■□□□□ 0.25
PKD1-225ENST00000562297 ZNF398Q8TD17 642 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 CDKN2AIPNLQ96HQ2 116 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 GPR78Q96P69 363 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 TM6SF2Q9BZW4 377 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 KCNK13Q9HB14 408 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 TLK1Q9UKI8 766 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 USH1CQ9Y6N9 552 aa16.61■□□□□ 0.25
PKD1-225ENST00000562297 CD3EAPO15446 510 aaKnown RBP16.6■□□□□ 0.25
PKD1-225ENST00000562297 FSBPO95073 299 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 DLDP09622 509 aaKnown RBP16.6■□□□□ 0.25
PKD1-225ENST00000562297 SBK3P0C264 359 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 COL6A2P12110 1019 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 TCF3P15923 654 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 CSNK1DP48730 415 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 CLCN5P51795 746 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 SLC12A1Q13621 1099 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 SEMA3AQ14563 771 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 TAF1BQ53T94 588 aaPredicted RBP16.6■□□□□ 0.25
PKD1-225ENST00000562297 PITRM1Q5JRX3 1037 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 GLT6D1Q7Z4J2 308 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 GPATCH11Q8N954 259 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 ELMO2Q96JJ3 720 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 OLFM1Q99784 485 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 TRIM55Q9BYV6 548 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 LINC00597Q9H2U6 94 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 NMRAL1Q9HBL8 299 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 PAPLNO95428 1278 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 TROVE2P10155 538 aaKnown RBP eCLIP16.6■□□□□ 0.25
PKD1-225ENST00000562297 CPA3P15088 417 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 CRABP2P29373 138 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 CTSOP43234 321 aaPredicted RBP16.6■□□□□ 0.25
PKD1-225ENST00000562297 DLG1Q12959 904 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 PTPRRQ15256 657 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 FUT11Q495W5 492 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 GALNTL6Q49A17 601 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 DGKKQ5KSL6 1271 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 ATG14Q6ZNE5 492 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 OR4K2Q8NGD2 314 aa16.6■□□□□ 0.25
PKD1-225ENST00000562297 OR4L1Q8NH43 312 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms