RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 HTR3EA5X5Y0 456 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 STX16-NPEPL1H3BU86 382 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 CHRNA1P02708 482 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 TCN1P20061 433 aaPredicted RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 ME2P23368 584 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 ATP5F1P24539 256 aaPredicted RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 RXRGP48443 463 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 WNT3AP56704 352 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 POU4F1Q01851 419 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 ITKQ08881 620 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 CEACAM7Q14002 265 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 HERC3Q15034 1050 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 FAM83EQ2M2I3 478 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 RBM20Q5T481 1227 aaKnown RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 OGFRL1Q5TC84 451 aaPredicted RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 CXCL17Q6UXB2 119 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 SPATA2LQ8IUW3 424 aaPredicted RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 THEM5Q8N1Q8 247 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 BHLHE22Q8NFJ8 381 aaPredicted RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 RSPH1Q8WYR4 309 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 PRKD2Q9BZL6 878 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 MRM3Q9HC36 420 aaKnown RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 GPBP1L1Q9HC44 474 aaPredicted RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 TREX1Q9NSU2 369 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 IPO11Q9UI26 975 aaKnown RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 Q9Y3F1 56 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 SPO11Q9Y5K1 396 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 E9PAM4 449 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 TADA2AO75478 443 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 PGFP49763 221 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 ENTPD1P49961 510 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 ANKDD1AQ495B1 522 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 RANBP10Q6VN20 620 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 SPNS2Q8IVW8 549 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 CCDC117Q8IWD4 279 aaPredicted RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 SCML4Q8N228 414 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 BBS5Q8N3I7 341 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 C2orf69Q8N8R5 385 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 DCUN1D1Q96GG9 259 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 BTBD9Q96Q07 612 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 SMOC2Q9H3U7 446 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 AGO3Q9H9G7 860 aaKnown RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 TBC1D13Q9NVG8 400 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 DSEQ9UL01 958 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 SDHDO14521 159 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 GPR182O15218 404 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 AP1G1O43747 822 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 HOXC13P31276 330 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 HTR7P34969 479 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 PLK1P53350 603 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 MYBPC1Q00872 1141 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 MAPRE1Q15691 268 aaKnown RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 MANEALQ5VSG8 457 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 GDF6Q6KF10 455 aaPredicted RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 ZFP1Q6P2D0 407 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 Q6ZNX1 250 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 AMIGO2Q86SJ2 522 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 SCN4BQ8IWT1 228 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 RTL3Q8N8U3 475 aaKnown RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 CEP295NLQ96MC4 621 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 COPS7BQ9H9Q2 264 aaPredicted RBP11.03□□□□□ -0.64
NEIL1-202ENST00000561643 ADA2Q9NZK5 511 aa11.03□□□□□ -0.64
NEIL1-202ENST00000561643 CD52P31358 61 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 DPP6P42658 865 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 MS4A2Q01362 244 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 EML3Q32P44 896 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 ZNF789Q5FWF6 425 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 AGAP9Q5VTM2 703 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 TMEM214Q6NUQ4 689 aaKnown RBP11.02□□□□□ -0.65
NEIL1-202ENST00000561643 GK5Q6ZS86 529 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 BEND5Q7L4P6 421 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 ZNF354CQ86Y25 554 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 AFAP1L2Q8N4X5 818 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 STON2Q8WXE9 905 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 MTG1Q9BT17 334 aaPredicted RBP11.02□□□□□ -0.65
NEIL1-202ENST00000561643 MRPS26Q9BYN8 205 aaKnown RBP11.02□□□□□ -0.65
NEIL1-202ENST00000561643 NT5MQ9NPB1 228 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 TBCCD1Q9NVR7 557 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 SELENONQ9NZV5 590 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 VPS28Q9UK41 221 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 TSC22D4Q9Y3Q8 395 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 HS3ST4Q9Y661 456 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 DNAH12Q6ZR08 3092 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 HEATR9A2RTY3 570 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 FOXD2O60548 495 aaPredicted RBP11.02□□□□□ -0.65
NEIL1-202ENST00000561643 DNAJA2O60884 412 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 SERPINB7O75635 380 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 CYP11A1P05108 521 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 CDH2P19022 906 aaPredicted RBP11.02□□□□□ -0.65
NEIL1-202ENST00000561643 MAXP61244 160 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 EIF4EBP2Q13542 120 aaPredicted RBP11.02□□□□□ -0.65
NEIL1-202ENST00000561643 PTK2BQ14289 1009 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 TFAP2DQ7Z6R9 452 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 SLC7A5P1Q8MH63 180 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 FAM156AQ8NDB6 213 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 GABPB2Q8TAK5 448 aaPredicted RBP11.02□□□□□ -0.65
NEIL1-202ENST00000561643 CALML6Q8TD86 181 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 OLFM1Q99784 485 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 Q9H521 79 aa11.02□□□□□ -0.65
NEIL1-202ENST00000561643 IGSF5Q9NSI5 407 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms